Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3308 |
Symbol | |
ID | 8409386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013201 |
Strand | + |
Start bp | 108141 |
End bp | 110213 |
Gene Length | 2073 bp |
Protein Length | 690 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 645018240 |
Product | hypothetical protein |
Protein accession | YP_003175761 |
Protein GI | 257372987 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACGACG CTGCCGTCTC CGCTCGACGC TGTTCGCCCA CGGTCCACGT CCACGACGTG CAGTCCCTCC TGGAACGTCC CCAGCGAGCC CGCGACCCGA TCGACATCGT GATGACGCCC GAGCAGCTCC ACCAGCGCAA CTGCAAGCGG GCGCTCGCAC AGCGCAGCCG GCCCCGTTCG TCGGTCCTGT TTCGGACGCC GATCGACGTG GCGTCGCGGG TCCTCTCGAC CCACGAGGGC CGAGCGGTCG AGACGCTCGA CCGGCTCGAC CGGCTCCGGC TGTTCCGGAC GCTCCTCGAC GAGCCGCCCG CGGGCGTCGG GGCGCTCACC ACCGTCTACG GCACGGCACT GACCGAGCAC GCCGAGTCGA TCGAGGTCGC TCGCGAGGAG CTCCAGCTCC TGACCGGCGG GCGAGCCGAC CGGGCGGAGG CGCTCGACGA CGTTCGCTCG TCGCTGTCGG CGGCTGCCAG TGCCGACACG CGCGCGCTCC GTACCGGGGT GGGTGCTCTC GTCGACGCTC TCGACGAGCG TGTCGCGGCC GCTCCAGCTC CCGGCGCTGT CTTTCGGGCC TGTGCGAGCG CGATCGAGGA GACCGACGGC GCAGTGTGGT CGGCGACGTT CCCGACGATC GAGCGGATCG ATCTCGCTGG CGTCAGCACG CTCGGCGCGC CGATCCGAGA CTTTCTCACG GCGGTCGAGG CGGCGACCGA CGTCGCCGTC CACTACTACC TCCGGGCCGG GACCGGTCCC CGGATCGCCC GTCGGCTGGC TGCCCGGTCC GGGATCGCCG ACACCGCCCC GGACCGCGTC GATCCGTCGC CCGACCGCCG GCTCGACCAG CCGCCGCGAA CGACCGAGAT CGCGGTCGAG ACGAGACACG ACGAGGCCCG CACCGCGGCG GCGATCGTCG ACGGGGCGCT CGAAGCGGGT GCCGGCGTCG ACGACGTCGC GCTCGTCGCT CGGGACGTCG ATCGCTACGA GCGGCCGGTC CGGCGCGCGC TGTCGACGTA CGGACGGCAT CCGTCGGTCT GGACGCAGCT CCCGCTGACC CGGACGCTCC CCTACCGGCT CGTCGCCGCC GTCTGTGAGC TGCTGGGGGC GGCCGCGGCC GACGACATCG CCGCCGACAC GCTGGTGGAA CCGCTCGCGC TCCAGTGGAT CGCACCGCGC GGCCGTCGCG ACCGCCCGAC GCCACCGTCG ACGATACACG CGCTCGATCG TGCGCTCGAC GGCGCGTCTC GCTCGCGGGT CGGGTGGCTC ACGGCCGTCG GGAAACTCGA CGGCGTCGAT ACGACCGCAC GCGAAGCGGC GGCCGGCCTG CTGAACTGGA TCGGCCAGCA GCCCGCCGAG CCCGCGCCAG CCGACATCTG TTCCGTTCTG GAGCCCGTCG TCGACGCGTT CGAGGAGGGC GTCCTGCCCC GGCGGGCCGC GTCCGACGGG CCGGACTACA CCGAGACCGC CCAGACCGCC CGCGCCGTCG AGCGGGTCGC CGGCACGGAC GACGGCGATC ACCTCCTTCG CGAGACGCGC GCGAAGTACG CCGACTGGCT CGAACGGGGC CACCTCGATC CGTCGTGGGA CACCGTCCTG ACGGTCCTCG ACGCGCTCGC GACCGCCCGG CCCGGCCGGC GCGAACACGC CAACGCCGAG CGCATCGACG TGCTCGACGC GACGGACGCC TGGCTCCGGA CGTACTCGCT CGTGATCGCG CTGGGGTTCG TCGACGGCGA GTGGCCACAG CGCCCCCACG GCGAGTTGCC GGCCGAACTG CGGGCGGCCA TCGTCCGGGG CCAGACACGG TCGGCCCGTC AGTTCCCCGT CCGGGGGGCC TGGTCGACAG AGCGCGACCT CGATCACTTC GCCGACGCGG TCCGGGCCGC CACCGATCAC CTCGTCGTCA CTCGCTACAC CCGTGACGTG GACGGCGTCC GCTACGATCG GTCGCCGCTG CTTGCCCACC TGGACGCCAA CCGCCTCGCG CCCGAGCGGG TCCGTCGATT GCGGGCCGGC GACGCCTCGA CGCTCCACGA CTGGATCGAC GACGGCACGA GCGTGGGGGG TGGCGGCCGG TGA
|
Protein sequence | MDDAAVSARR CSPTVHVHDV QSLLERPQRA RDPIDIVMTP EQLHQRNCKR ALAQRSRPRS SVLFRTPIDV ASRVLSTHEG RAVETLDRLD RLRLFRTLLD EPPAGVGALT TVYGTALTEH AESIEVAREE LQLLTGGRAD RAEALDDVRS SLSAAASADT RALRTGVGAL VDALDERVAA APAPGAVFRA CASAIEETDG AVWSATFPTI ERIDLAGVST LGAPIRDFLT AVEAATDVAV HYYLRAGTGP RIARRLAARS GIADTAPDRV DPSPDRRLDQ PPRTTEIAVE TRHDEARTAA AIVDGALEAG AGVDDVALVA RDVDRYERPV RRALSTYGRH PSVWTQLPLT RTLPYRLVAA VCELLGAAAA DDIAADTLVE PLALQWIAPR GRRDRPTPPS TIHALDRALD GASRSRVGWL TAVGKLDGVD TTAREAAAGL LNWIGQQPAE PAPADICSVL EPVVDAFEEG VLPRRAASDG PDYTETAQTA RAVERVAGTD DGDHLLRETR AKYADWLERG HLDPSWDTVL TVLDALATAR PGRREHANAE RIDVLDATDA WLRTYSLVIA LGFVDGEWPQ RPHGELPAEL RAAIVRGQTR SARQFPVRGA WSTERDLDHF ADAVRAATDH LVVTRYTRDV DGVRYDRSPL LAHLDANRLA PERVRRLRAG DASTLHDWID DGTSVGGGGR
|
| |