| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hmuk_3292 |
|---|
| Symbol | |
|---|
| ID | 8409370 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halomicrobium mukohataei DSM 12286 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013201 |
|---|
| Strand | - |
|---|
| Start bp | 92440 |
|---|
| End bp | 93276 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 645018226 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003175747 |
|---|
| Protein GI | 257372973 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.876722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.149263 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGAC TCGACTCGGA GATGGAGCGC CGTTTCGACA AGTCGACATC GGAGTTACGG
GCGGAGGCCG ACCAGTTCAA GACGCGGGCC CGGTCCGACC CGGCGGTCGT CGCCACGTAC
CTGCCGCGGC TGCGAAAGCT CCTGGAAGCT GCGGGCTACA GCCGCGACGA GATGATGGTC
AGAGACGACG TTCAGCGGAC GATACTGGCG ATCGCGGACC AGCAGCCAGA GGCACTCTCC
GACGAGTATC CCGACCTGGT GGCGGCGTTC CTCGACACGC GCGAGACGAG AGTCCTGACC
CAGCGACTCC TGCACAACTG CGCCGAGCTC TGGGCTTACG GCGTGACGCG CCAGGAGATC
ACCGACGGGC TCGACGTGGT GGAAGGCGAG ATCGTCGACC AGCTCGCAGA CATCGCGGAG
CAGTTCGACG ACGACGGCCG GGTGCCGGGC AACGGTGCCA CGGCGATGGC GCTCAGCCAG
CGGGTGGCCG ACTTCGCACA CAGCGTCGCG GGCCGCCAGC AACTCGTCGT CGAGGCCGCC
TCCGACGCGC TGTTCGACCT CGTCAGATTC CACGCCAGCG AGAAAGGGAT CGACCCGATC
GACGGGGCCG TCGACCTCCG ATCCCGATAC GAGACCGACA GCGAGCCGTT CGTACGCGGC
TTCTCCGATC GGGGAACGAT CGAATCGATG CGGGAGACCG AGGAGACCCA GACGAAGAAC
TACGTCCTCC GATACGTGGT CGACGCACTG GTCGCCACGT CTCTGATCGT CAGCGTCGAG
CGAGACGAGG CCCGAATGCT GCGGATCGAG GCGGTTCTCG CCGAGCGAGA TCAGTGA
|
|---|
| Protein sequence | MAGLDSEMER RFDKSTSELR AEADQFKTRA RSDPAVVATY LPRLRKLLEA AGYSRDEMMV
RDDVQRTILA IADQQPEALS DEYPDLVAAF LDTRETRVLT QRLLHNCAEL WAYGVTRQEI
TDGLDVVEGE IVDQLADIAE QFDDDGRVPG NGATAMALSQ RVADFAHSVA GRQQLVVEAA
SDALFDLVRF HASEKGIDPI DGAVDLRSRY ETDSEPFVRG FSDRGTIESM RETEETQTKN
YVLRYVVDAL VATSLIVSVE RDEARMLRIE AVLAERDQ
|
|---|
| |