Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hmuk_3225 |
Symbol | |
ID | 8409300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halomicrobium mukohataei DSM 12286 |
Kingdom | Archaea |
Replicon accession | NC_013201 |
Strand | + |
Start bp | 3271 |
End bp | 4392 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645018161 |
Product | ABC transporter related |
Protein accession | YP_003175686 |
Protein GI | 257372912 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.711739 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGCAA TAACTCTCGA TGGATTGACG AAGAGCTACG ACGCGACTGA CATGGACGAC ATCCCCGACA ACGAGATCGT CGCCGTCGAG GACGTCGACC TCGAAATCGA GGACGGCGAG TTCCTCGTCT TCGTCGGTCC GTCGGGCTGT GGGAAGTCGA CGACGCTGCG ATGTATCGCC GGCCTCGAAG ACGCGACCGG CGGAGAGATC CGGTTCGGCG AGACGGTCGT CAACGATCTC CGGCCGCGCG ACCGCGACGT GGCGATGGTG TTCCAGAACT ACGCGCTGTA CCCCCACATG ACGGTCCGGA AGAACATCAG CTTCGGTCTG CGCCTCTCGT CGACGCTGAC GACGCCGGAG ATCGACAGTC GCGTCACCGA CGTGGCCGAG ATGATGGGGA TCGAGGACCT CCTCTCGAAG ACGCCGGACG AGCTATCGGG CGGCCAACAG CAACGCGTCG CGCTCGGGCG TTCGATCGTG CGCGAACCGG GCATCTTCCT GATGGACGAA CCGCTCTCGA ACCTCGACGC GAAGCTTCGG GCAGAGATGC GCACCGAGAT CCAGGAGCTC CAGAACGACC TCGGCGTGAC GACGGTGTAC GTCACCCACG ACCAGACCGA GGCGATGGCG ATGGGCGATC GAATCGCCGT GCTGAACGAC GGGCTCCTCC AGCAGGTCGC ACCGCCCGAA GAGATCTACC GGCGTCCCGC AAACGAGTTC GTCGCCGGCT TCATCGGGAG CCCGAGCATC AACTTCTTCG ACGTGAGCGT CGACGGACAG ACGCTGACCG CCCCGAGTGG GTTCAGCTAC GAACTCGAAG ACCACAGCGT CGAGGACGAC ACCGTCCGCC TCGGGATCCG ACCGGAAGAC CTGACGATCG AAGAGGGTGG GGACGACATG ACCGTCACCG TCGTCGAGAA GATGGGCAAC GAGAACTTCA TCTACGGCAC CGTCGGCGAC GTGGAGGTCG TCGCCCGGAC CCCGGTGACC GTTCGCCCAG AGCCCGACCA GCGGGTCGGC ATCTCCTTCG CCGAATCGGC GATGTACCTC TTCGACAGCG AAACCGGTGC GGCGATCAAG ACCAAGACCG ACGAGATCGA ACCGCAGGCG GCGCAGTTCT AA
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Protein sequence | MTAITLDGLT KSYDATDMDD IPDNEIVAVE DVDLEIEDGE FLVFVGPSGC GKSTTLRCIA GLEDATGGEI RFGETVVNDL RPRDRDVAMV FQNYALYPHM TVRKNISFGL RLSSTLTTPE IDSRVTDVAE MMGIEDLLSK TPDELSGGQQ QRVALGRSIV REPGIFLMDE PLSNLDAKLR AEMRTEIQEL QNDLGVTTVY VTHDQTEAMA MGDRIAVLND GLLQQVAPPE EIYRRPANEF VAGFIGSPSI NFFDVSVDGQ TLTAPSGFSY ELEDHSVEDD TVRLGIRPED LTIEEGGDDM TVTVVEKMGN ENFIYGTVGD VEVVARTPVT VRPEPDQRVG ISFAESAMYL FDSETGAAIK TKTDEIEPQA AQF
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