Gene Hmuk_3225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_3225 
Symbol 
ID8409300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013201 
Strand
Start bp3271 
End bp4392 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content64% 
IMG OID645018161 
ProductABC transporter related 
Protein accessionYP_003175686 
Protein GI257372912 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.711739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAA TAACTCTCGA TGGATTGACG AAGAGCTACG ACGCGACTGA CATGGACGAC 
ATCCCCGACA ACGAGATCGT CGCCGTCGAG GACGTCGACC TCGAAATCGA GGACGGCGAG
TTCCTCGTCT TCGTCGGTCC GTCGGGCTGT GGGAAGTCGA CGACGCTGCG ATGTATCGCC
GGCCTCGAAG ACGCGACCGG CGGAGAGATC CGGTTCGGCG AGACGGTCGT CAACGATCTC
CGGCCGCGCG ACCGCGACGT GGCGATGGTG TTCCAGAACT ACGCGCTGTA CCCCCACATG
ACGGTCCGGA AGAACATCAG CTTCGGTCTG CGCCTCTCGT CGACGCTGAC GACGCCGGAG
ATCGACAGTC GCGTCACCGA CGTGGCCGAG ATGATGGGGA TCGAGGACCT CCTCTCGAAG
ACGCCGGACG AGCTATCGGG CGGCCAACAG CAACGCGTCG CGCTCGGGCG TTCGATCGTG
CGCGAACCGG GCATCTTCCT GATGGACGAA CCGCTCTCGA ACCTCGACGC GAAGCTTCGG
GCAGAGATGC GCACCGAGAT CCAGGAGCTC CAGAACGACC TCGGCGTGAC GACGGTGTAC
GTCACCCACG ACCAGACCGA GGCGATGGCG ATGGGCGATC GAATCGCCGT GCTGAACGAC
GGGCTCCTCC AGCAGGTCGC ACCGCCCGAA GAGATCTACC GGCGTCCCGC AAACGAGTTC
GTCGCCGGCT TCATCGGGAG CCCGAGCATC AACTTCTTCG ACGTGAGCGT CGACGGACAG
ACGCTGACCG CCCCGAGTGG GTTCAGCTAC GAACTCGAAG ACCACAGCGT CGAGGACGAC
ACCGTCCGCC TCGGGATCCG ACCGGAAGAC CTGACGATCG AAGAGGGTGG GGACGACATG
ACCGTCACCG TCGTCGAGAA GATGGGCAAC GAGAACTTCA TCTACGGCAC CGTCGGCGAC
GTGGAGGTCG TCGCCCGGAC CCCGGTGACC GTTCGCCCAG AGCCCGACCA GCGGGTCGGC
ATCTCCTTCG CCGAATCGGC GATGTACCTC TTCGACAGCG AAACCGGTGC GGCGATCAAG
ACCAAGACCG ACGAGATCGA ACCGCAGGCG GCGCAGTTCT AA
 
Protein sequence
MTAITLDGLT KSYDATDMDD IPDNEIVAVE DVDLEIEDGE FLVFVGPSGC GKSTTLRCIA 
GLEDATGGEI RFGETVVNDL RPRDRDVAMV FQNYALYPHM TVRKNISFGL RLSSTLTTPE
IDSRVTDVAE MMGIEDLLSK TPDELSGGQQ QRVALGRSIV REPGIFLMDE PLSNLDAKLR
AEMRTEIQEL QNDLGVTTVY VTHDQTEAMA MGDRIAVLND GLLQQVAPPE EIYRRPANEF
VAGFIGSPSI NFFDVSVDGQ TLTAPSGFSY ELEDHSVEDD TVRLGIRPED LTIEEGGDDM
TVTVVEKMGN ENFIYGTVGD VEVVARTPVT VRPEPDQRVG ISFAESAMYL FDSETGAAIK
TKTDEIEPQA AQF