Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2501 |
Symbol | |
ID | 8381654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2685089 |
End bp | 2687521 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645005266 |
Product | heavy metal translocating P-type ATPase |
Protein accession | YP_003162436 |
Protein GI | 256833709 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2217] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01511] copper-(or silver)-translocating P-type ATPase [TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.792891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACACC CCCAACAATT GCCCACCGAC ACCCCGACCG ACCGTCCTGT TCTTGCCGAA GTGGACCTCT CGGTGTCCGG GATGACCTGC GCGTCATGTG TGGCGCGTGT TGAACGGAGA ATCAACAAGA TACCCGGGGC TACCGCCACC GTGAACCTCC CCCTGGAGAG CGCCCATGTG GTCCTTACCG AACCTGTCAG CAACGAAGAC CTGATCGCGG CTATTGAACG CGCCGGATAT ACCGGAGCAG TCACCTCGCG CGCACAAACG CAGGGCATTC CCGCGTCAGA GTCCACCGTA ACTCAGCCAC CAGATGCGGG TGACGAGCAC ACCAGCCACG GTGCTGCCCT TGACGGCGGT CACGCAGGCC ACGATGGGGA CGCGGACACC TCCGCACCAG TTCCTGACCG GGGCGCTGAC TTGGCGCACC GGCTTCGGTG GTCTGCGGTT CTCACGGTCC CTGTCCTGCT GTTGTCGATG ATCCCTGCCA CCCAGTTCAC CGGGTGGCAG TGGGTTGTTG CCGCGTTATC TCTCCCTGTT GTCACGTGGG GTGCGTGGCC ATTTCACCGG GCGGCGTTCC GGGCAGCTCG GCACGGGTCT TCCACCATGG ACACACTGGT GTCCACTGGT GTTCTTGCCG CCACCGCCTG GTCGTTGTGG GCGCTGTTCT TTGGTGGCGC AGGCGAGTTG GGGATGCGCA TGACCATGTC GTTGATCCCG GCAAGGTCCC ACGGCAGTAT GGCGGAGATC TATTTTGAGG TCGCTGCTGT GGTCACCACT TTCTTGTTAG CAGGCCGGTT CGCGGAACAC CGGTCACGGC GTCAAGCCGG CGACGCGTTG CGGTCGCTGC TTGAACTGGG TGCGAAGGAT GCCCACCTGG TGCGTCGCGC GAACGGCGAG ACAGTTGACC TCAAGGTCGC TGTTGATGAC CTCATCGTGG GTGACGTGTT TGCGGTTCGC CCTGGTGAGA AGATCGCGAC TGATGGGGTG GTTGTCCGCG GCCAATCCGC TGTGGACACG TCACTGCTCA CTGGAGAACC ACTGCCTGTC GATGTGCGCG AAGGCGACCA CGTGACCGGC GCCACGATCA ACACGTCCGG GTACCTGGAT GTGGAAGCAA CACGGGTAGG TAAAGACACC ACGCTGGCGG CGATGGGTCG TTTGGTCAGC CAAGCACAAA CGGGTAAGGC CCCCATTCAA CGATTGGCCG ACCGAATCTC GGCAGTTTTT GTGCCGATTG TTATGGTCAT AGCTGTCCTG GTGTTTGCGG GATGGCTGGT GTGGGGGCCG TCACTGTCGG CTGCCTTCAC GGCAGCTGTT GCGGTCCTCA TCATTGCGTG CCCATGCGCT CTGGGGTTAG CAACTCCGAC GGCGTTGCTC GTCGGTACGG GGCGAGGGGC GAGTCTAGGG ATCCTCATTA AGGGACCAGA AATCCTGGAA TCAACCCGAC GCATCGACAC GGTCGTCCTC GACAAAACTG GGACACTGAC CGCTGGTCGA ATGACCGTGG ACACAGTGTT TGGCCCCGAT GAAGTCCTTA TCTACGCGGG GGCTGTGGAA CAGGGGTCAG AGCACCCCAT TGCTCAGGCC ATTGTTGACT CAGCCCGAAC CGTGCACCCC ACCGCACCTG ACCCTGACGG GGTTGACCGG AACTGGGAAG TCACCGATTT CCAGGCCGCT GCTGGTGGTG GAGTCAGTGG TGTTGTACGT CTTCCCCACT CAGGGGTGGA CATGGGGGCA CGAGTGCTTG TCGGGCGTCC TGCATGGCTT GCGGAGCAAG GAGTGTCCAC CGACCGGGTC GACCTCAGGC AGATCGTGGC CGACGCTGAG GCGGATGGCG CGACCGCAAT CGCGGTCGCG TGGGCGGGCC AATGGCAGGG TGTCATTACT CTCCGTGACC AGTTGAAAGA CACCTCAGCA ACAGCTGTGC GTGAGTTCCG TGACTTGGGG TTGAGTCCGG TTCTTCTCAC TGGTGATAAC CGGGGTGCAG CATTAGCGGC CGCCCAAGAA GCAGGAATCA CCGAGGACAA CGTGTACGCT CAGGTTCTGC CCGCTGACAA AGTCTCTGTT GTGCGTGACT TACAAGCACA GGGGCGGACC GTGGCCATGG TTGGTGATGG GGTCAACGAT GCGGCAGCCC TGGCTGTCGC CGACCTCGGT CTTGCTATGG GCACCGGCAC GGATGTAGCC ATGCAAGCGT CCGACATCAC ACTGGTCCGA GGTGACCTGC GCGCTGCAGC GACCGCAATC CGGTTATCCC GCGACACGTT GCGCATTATC AAACAAAACC TGTTCTGGGC ATTTGCCTAC AACGTTGCCG CGATCCCACT GGCAGCAGCA GGATTACTCA ACCCCATGAT CGCCGGTGCA GCGATGGCTG CCAGTTCCGT CATTGTCGTG TCAAACTCCT TGCGGTTACG TCGCGCCGGG TAA
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Protein sequence | MAHPQQLPTD TPTDRPVLAE VDLSVSGMTC ASCVARVERR INKIPGATAT VNLPLESAHV VLTEPVSNED LIAAIERAGY TGAVTSRAQT QGIPASESTV TQPPDAGDEH TSHGAALDGG HAGHDGDADT SAPVPDRGAD LAHRLRWSAV LTVPVLLLSM IPATQFTGWQ WVVAALSLPV VTWGAWPFHR AAFRAARHGS STMDTLVSTG VLAATAWSLW ALFFGGAGEL GMRMTMSLIP ARSHGSMAEI YFEVAAVVTT FLLAGRFAEH RSRRQAGDAL RSLLELGAKD AHLVRRANGE TVDLKVAVDD LIVGDVFAVR PGEKIATDGV VVRGQSAVDT SLLTGEPLPV DVREGDHVTG ATINTSGYLD VEATRVGKDT TLAAMGRLVS QAQTGKAPIQ RLADRISAVF VPIVMVIAVL VFAGWLVWGP SLSAAFTAAV AVLIIACPCA LGLATPTALL VGTGRGASLG ILIKGPEILE STRRIDTVVL DKTGTLTAGR MTVDTVFGPD EVLIYAGAVE QGSEHPIAQA IVDSARTVHP TAPDPDGVDR NWEVTDFQAA AGGGVSGVVR LPHSGVDMGA RVLVGRPAWL AEQGVSTDRV DLRQIVADAE ADGATAIAVA WAGQWQGVIT LRDQLKDTSA TAVREFRDLG LSPVLLTGDN RGAALAAAQE AGITEDNVYA QVLPADKVSV VRDLQAQGRT VAMVGDGVND AAALAVADLG LAMGTGTDVA MQASDITLVR GDLRAAATAI RLSRDTLRII KQNLFWAFAY NVAAIPLAAA GLLNPMIAGA AMAASSVIVV SNSLRLRRAG
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