Gene Jden_2450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2450 
Symbol 
ID8381603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2627575 
End bp2628471 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content59% 
IMG OID645005215 
Productprotein of unknown function DUF58 
Protein accessionYP_003162385 
Protein GI256833658 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.675441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00731515 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGATA TTTCCCGGCT TGCTCAGGTG CGAGCCCACG TGGATCTTCC GATTTTGAAG 
CGGGCGGCTG GCCTGCTTGA GGGGTATCAC CGGTCCATTT TTAAAGGACA CGGCCAGGAT
TTTGACGACT TGTCGTTGTA TTCGCCTGGT GACGATGTCT CGGACATTGA CTGGAAGTCA
TCGGCGCGTG CCGGGATCCC TATTATTCGC CGGTTTCAGC AGCAGTCGAA TCTCTCGGTG
ATTCTTGTTG CGGACACCGG GCGCAACATG GCGGCGATGT CGTCTGGGGG TACCCCCAAA
AGTGATGCTG CGGTGTTCCT GGCCACGTTG ATTGCGTATG TGGCCCGGGA TCGCGGCGAT
CGGGTGGCTC TTGTTGCCGG CGATCATGAC CGGTTAATCC ACCGCCCACC GCGTGCCTCA
ACTCAGGACC TTGAGGTGAT GCTCACCCAA TTGGATGCCA CGTTCTCACC AACTGCTCCT
GCCAGTGACC TTGCCGCCAT TTTGCGGCGT ACTCTCACGT TGTTTCACCG GCGGGCCCTG
GTTGTCATTG TCACTGATGA GGTGCGCCCT GCACCGGAGC ACGAAGAGAT TTTGCGGCAA
TTGCGGGTGC GGCACGAAGT GCTTGTTCTG CAAATTTCTG ATGCGTCCCC GTTTGTCGGT
GCGCGCCTGA ATAATGGGCA GCAGGTCGCC GATGTGGACC GGCCTCTTCA CCTGCCCAGG
TTCCTTGCCC GCCGTTCATC CATTCATGCC GAGGCCGCCC AGTTGGTGCG CCAACGGCGT
GCGGACTCGC AACGCATGTT GCAGCGAAAC GGCATCGTGT CTGTGGTCAT TGACACCCCC
GAAGATGCGA TCACTCGCTT CACCCATGCG GTACGCAAAC AGCGCCATCT GACCTAG
 
Protein sequence
MTDISRLAQV RAHVDLPILK RAAGLLEGYH RSIFKGHGQD FDDLSLYSPG DDVSDIDWKS 
SARAGIPIIR RFQQQSNLSV ILVADTGRNM AAMSSGGTPK SDAAVFLATL IAYVARDRGD
RVALVAGDHD RLIHRPPRAS TQDLEVMLTQ LDATFSPTAP ASDLAAILRR TLTLFHRRAL
VVIVTDEVRP APEHEEILRQ LRVRHEVLVL QISDASPFVG ARLNNGQQVA DVDRPLHLPR
FLARRSSIHA EAAQLVRQRR ADSQRMLQRN GIVSVVIDTP EDAITRFTHA VRKQRHLT