| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2412 |
|---|
| Symbol | |
|---|
| ID | 8381565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2586287 |
|---|
| End bp | 2587249 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645005176 |
|---|
| Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| Protein accession | YP_003162347 |
|---|
| Protein GI | 256833620 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
|---|
| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.353798 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGGC TTGATACAAC AGCACAACAC CTCCCGGGCT GGCGCCACGT GTACTCGGGG
AAGGTGCGTG ACCTGTATGA ACCTGATACC GATGCGCTCG GTGGGCCACA CCCGCTCGGC
GACGTTGTCC TTGTCGTCGC CTCCGACCGA GTCAGCGCTT ACGATCATGT CCTGTCCCCA
GGGATCCCTG GGAAGGGCAT CGTCCTGACA CAACTCAGCG TGTGGTGGTT TGAGCAACTC
GCGGAGATCG TCGGCAACCA CCTGGTCAGC CTTGAGGTTT CGGTGACACC AACCGATGGC
CTCATCCCCG CTGCCGTAGA TGGCCGGGCT ATGATCTGTC GTCGCTTGAC CATGTTCCCC
ATTGAATGTG TCGTCCGCGG ATACCTCACC GGCTCTGGAC TCGTGGAATA TCGCGACAAC
TCCACCGTGT GCGGGGTGCC ACTGCCTGCA GGGCTCACTG ACGGCTCCCG ACTTGAGGTC
CCCATTTTCA CGCCCGCAGC CAAAGCTGAG GTTGGCGAGC ACGACGAAAA CATCACCTTT
GAGGACACCG CTCAACGCAT TGGATGGGCG GCAGCCGAAA TCCTTCGTGA CCACACCCTT
GCCGTGTACA CCCACGCGGA AGGCATTGCG CGCGAGCACG GTGTCATTCT TGCTGACACC
AAACTAGAGT TCGGAACCGA CCCGGTCACC GGAGAAATCC TCCTTGGCGA CGAAGTCCTC
ACCCCCGACT CCTCACGATT TTGGGATGCA CTCATGTGGG CACCCGGCGG AGCGCAACCA
AGCTTTGACA AACAGTTCAT CCGTGACTGG TTGACCTCAT CAGAATCCGG GTGGGACCGC
AGCAGTGACA CCCCACCACC GGCCTTGCCG CAGCACGTCG TGGCAGCAAC CCAGGAACGC
TACCTTGAGG CGTACACCCG CATCACCGGA AAAAGCCTCA CCCTACCCAC TGACGCGCAG
TAA
|
|---|
| Protein sequence | MSGLDTTAQH LPGWRHVYSG KVRDLYEPDT DALGGPHPLG DVVLVVASDR VSAYDHVLSP
GIPGKGIVLT QLSVWWFEQL AEIVGNHLVS LEVSVTPTDG LIPAAVDGRA MICRRLTMFP
IECVVRGYLT GSGLVEYRDN STVCGVPLPA GLTDGSRLEV PIFTPAAKAE VGEHDENITF
EDTAQRIGWA AAEILRDHTL AVYTHAEGIA REHGVILADT KLEFGTDPVT GEILLGDEVL
TPDSSRFWDA LMWAPGGAQP SFDKQFIRDW LTSSESGWDR SSDTPPPALP QHVVAATQER
YLEAYTRITG KSLTLPTDAQ
|
|---|
| |