Gene Jden_2368 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2368 
Symbol 
ID8381523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2532804 
End bp2533811 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content59% 
IMG OID645005130 
Producttransport system permease protein 
Protein accessionYP_003162305 
Protein GI256833578 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4605] ABC-type enterochelin transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0419043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC CAGCTCGCGT GCTCGCCTCA CCCTCTGCAC GCCGACCCCA CCTTGCGCTT 
GCCTCACCAG CCGGTGTGAC CGCACTGCTG ACCATCCTCG CCGTGCTGTC AGTGGCTGTG
TTTCTCACGC TGGGGCTTGA GGGAAACATC GCCTACATCC TGCCGCGCCG CATCACCCGA
GTCAGCGCCA TGGTCCTCGT CGGTGTGGCC GTTGCTTTAT CCACCGTCAT GTTCCAAACA
GTGACTGCGA ACCGCATCCT CACCCCATCC ATCATGGGGT TTGATGCCCT GTACCTGCTG
CTGCAAACCG TGGTGGTGTT CGTTTTTGGG GCCAGTGCCT GGCTCACCAC CGACCAATCC
GTGCGCTTCC TCATTGAAGT GGCACTCATG GTGACGTTCT CGTTCCTGCT CTACCGGTGG
CTGTTCACCG GGGCAGTCAC CTCACTTCAC CTCATGCTGC TCGTCGGGAT TGTTCTCGGA
ACCCTGTTCC GTGGGCTCGC ATCACTCCTG CAACGCCTCA TTGACCCCAG CGAGTACATT
ATTTTGCAAG ACCTGTTCTT CGCTTCGTTT AACCTGGTCG ATCCCGTTCT CGTGTGGATT
TCAGCAGCAC TTGTTGCCGC GTGTGCAGCT CTCGCATGGC GGATGCGCCA CATCCTCGAC
GTCATGGCAC TCGGCCGCTC CCACGCGATC AACCTGGGGG TCAACCATCA CCGCACCGTC
ATGACAGTGC TGGTCATGTC GTCGCTGCTG GTTTCTGTGT CAACCGCGCT CGTTGGGCCA
GTCACATTCT TTGGTTTGCT CATCGCCTCC TTGGCCTACC AGATGTGCCG CAGCTTCAGC
CACGGCTGGA TCCTTGCCAT CACCTCCCTG CTGGGCATCA TCACTCTTGT TGGGGGTCAA
CTCGTCCTGG AGCACGTCTT CGGGTTCGCG ACCGCCCTAT CGATCGTCAT CGAATTCACC
GGTGGCATTG TGTTCCTATT CCTGCTGTTG AGAGGCTCGT TGAAGTGA
 
Protein sequence
MPHPARVLAS PSARRPHLAL ASPAGVTALL TILAVLSVAV FLTLGLEGNI AYILPRRITR 
VSAMVLVGVA VALSTVMFQT VTANRILTPS IMGFDALYLL LQTVVVFVFG ASAWLTTDQS
VRFLIEVALM VTFSFLLYRW LFTGAVTSLH LMLLVGIVLG TLFRGLASLL QRLIDPSEYI
ILQDLFFASF NLVDPVLVWI SAALVAACAA LAWRMRHILD VMALGRSHAI NLGVNHHRTV
MTVLVMSSLL VSVSTALVGP VTFFGLLIAS LAYQMCRSFS HGWILAITSL LGIITLVGGQ
LVLEHVFGFA TALSIVIEFT GGIVFLFLLL RGSLK