Gene Jden_2343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2343 
Symbol 
ID8381498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2504299 
End bp2505708 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content56% 
IMG OID645005105 
Producthistidine kinase 
Protein accessionYP_003162280 
Protein GI256833553 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCCG GTTTCCTTGC CCTCCTCACA TTTTCCTTGG GCACTGCCGG AATCTCCATC 
TACCTGCTGC AACTCACAGA CCTGCAACAA CGCATCGATG AGTCGCTTAC TCGGGCAACT
GGGCAACTGT CCACAAGCCT CGAATCAGGT ATCGATCCGG GCTCAGGTCA GCCTTTCACG
AGCATCGACG ATGTGTTGTA CCGGGCTATG CAAACCGTGA TGCCAGCCCC CAACGAAGGG
CTTCTCGCCA CCACCAACGG CCAACTTCGG TGGACTGCCC CGTCCACTGT GCCGCTACGT
ATTGAGGAAG ACCCTGACCT AGTCGCATAT GTCACCAGTG CAAAAACTGA CGGTAATGCC
ACGATCACCA CGTTAACCAC CGCACAACGC ACCTACCGCA TTGTTGTCAT ACCCATGTCG
CTGACCAGCG ATCCAACCCC TGGGCTTATC GCCGTGGCAT ACGACTACAC AAAGGAAGTT
GCTGACCTCA ACCAGTCATT TATACCCGCA CTGTGGGTCG GTTTGGCCAC CCTTGTCACC
AGTATCGCGT TGGGGTGGGT TGTCGTGGGG CGGCTCCTCC AGCCGCTCCG ACAATTGCGG
CACACCGCCG CGCAAATCAC CGAGGATGAT CTCAGCACAC GCATTCCCGT CACAGGCAAC
GATGACCTCG CTGAACTCAC CCGAACAGTG AACTCCATGC TGGACCGAGT AGAAACCGCG
ATCAGCTCGC AACGGCAACT ACTAGACGAT GTTGGGCACG AGTTACGCAC CCCCGTCACC
ATCGTGCAAG GGCACCTTGA ACTTCTTGAA ACGACTGACC CGCAAGAGGT TCACACAACC
CGAGAACTTG TCCTCGACGA ACTTGACCGC ATGACGGGCC TCATCAACGA CATCGTGCTG
CTCGCCAAAG CCCAACGCAC AGATTTTCTG ACCCCCAGCG AAGTTGACAT TGACGACCTC
ATGCATGAGG TCACTCACAA AGCCCAACCA CTAGGCGCAC GAGAATGGGT TACCAGCGCC
ACCACGGGCG TCGTGCAAAG TGTGGACCGG CAAAAAATTA CTCAAGCACT ACTACAACTC
GCAGACAACG CTGTGAAGTA CTCGCCAGAT AACACACGCA TCATTCTCGG AGCGAGCGCC
ACAAGTACTC ACATTTCGTT GTGGGTACAA GATGAGGGAT TTGGCATCGC ACCAGAAGAC
CACAAGGCAG TTTTCGACAG GTTCCACCGT GGAGACAACG CAAGCAGAGC CGACGGGTCT
GGGCTTGGAT TGAGCATCGT ACAAGCCATT GCAACCGCTC ACGGCGGCAC CGTGAACCTT
TCCTCACAGC CTGGTAAAGG AACAACCGTC ACGATCACAC TGCCACTCAC CCATATAGCG
ATGACCAGCA CTGAAAGCGA GACACCGTGA
 
Protein sequence
MLAGFLALLT FSLGTAGISI YLLQLTDLQQ RIDESLTRAT GQLSTSLESG IDPGSGQPFT 
SIDDVLYRAM QTVMPAPNEG LLATTNGQLR WTAPSTVPLR IEEDPDLVAY VTSAKTDGNA
TITTLTTAQR TYRIVVIPMS LTSDPTPGLI AVAYDYTKEV ADLNQSFIPA LWVGLATLVT
SIALGWVVVG RLLQPLRQLR HTAAQITEDD LSTRIPVTGN DDLAELTRTV NSMLDRVETA
ISSQRQLLDD VGHELRTPVT IVQGHLELLE TTDPQEVHTT RELVLDELDR MTGLINDIVL
LAKAQRTDFL TPSEVDIDDL MHEVTHKAQP LGAREWVTSA TTGVVQSVDR QKITQALLQL
ADNAVKYSPD NTRIILGASA TSTHISLWVQ DEGFGIAPED HKAVFDRFHR GDNASRADGS
GLGLSIVQAI ATAHGGTVNL SSQPGKGTTV TITLPLTHIA MTSTESETP