| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2199 |
|---|
| Symbol | |
|---|
| ID | 8381357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2374359 |
|---|
| End bp | 2375477 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645004953 |
|---|
| Product | Uroporphyrinogen III synthase HEM4 |
|---|
| Protein accession | YP_003162139 |
|---|
| Protein GI | 256833412 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1587] Uroporphyrinogen-III synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.116124 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCAGCA CACCACTGGC CGGATACCGC ATCGCCGTCA CCTCCGACCG GCGCTCAGCA
GACCTCATCG ACGCCTTCGA ACGGCGCGGC GCCCACGTCA TCCACGCACC ACTGCTGAAA
ATCGCACCCA AAGAACACGA CGAAGAACTC ATCAACGAAA CCCGCCGCAT CATCAATCAG
GCACCAGACA TCCTCATCGT CACCACCGCC TACGGATTTC GCCGATGGAT CGAAACCGCC
GACGCCGCCG GACTCGGTGA CGAGCTCGAA CGCGTCCTCA ACGCCACCCG CATCTACGTG
CGCGGCCCCA AAGCGCGCGG AGCCGTGCGC GCCCTCGGAT TCGACGACTG CGGCGTCTCA
CCCGATGAAC GCCTCATCAC TCTCGCCACC CAACTGGCCG AACACCCCCT CACCGGCACC
CGCATCGCCG TCCAACTCCA CGGACACGAC GACCTCACAG CCCTCGCCCG ACTCACCCTC
GCCGGAGCTG ACGTCACCAC AGTCACCCCC TACCGGTGGA CACCAGCCAC CGACACCGGC
GACAAACGCG AACAACTCCT CACCGCGCTC CTCAACGGTT CCATTGACGT CCTCACCTTC
ACCGCGGCCC CCGTCGTCGA CGCATTCTTC TCCTACGTCG CCGAACAATC CTGCACCTCC
CACATCCTCC ACCAACTACG CACCGTCACC ACAGTGGCCA CCGTCGGCCC CGTGACCGCA
GCCCCACTGA TCGCCCACGG CATCACCCCC CTCATCCCCG ACCGATTCCG CATGGGCGCC
ATGATCAAAC TCATCGTCGA CCACATGACC ACCGACGCCC GCACCACCAT CCCCACACCC
CACGGGCACC TCACCCTCCA AGGCAACCGC CTCACACTGA CCACCACAGA CAACACCACA
TGTGTGACCC TCACTGACTC CCAACGCGTG GTCATGCGTG CCCTCACCCA CACCCCAGGG
AACGTGGTCA CCCGAGCACA CCTCGGCACT CTCCTCGGCG TTGGGCACAC CGACCACGCC
CTCGACGTTG CGATCTCACG CCTGCGCACC GCCCTCCCGG ACTCACGGCT CATCTCCACC
GTCATCAAAC GCGGCTACCG ACTCAACGTG TCCCACTAG
|
|---|
| Protein sequence | MTSTPLAGYR IAVTSDRRSA DLIDAFERRG AHVIHAPLLK IAPKEHDEEL INETRRIINQ
APDILIVTTA YGFRRWIETA DAAGLGDELE RVLNATRIYV RGPKARGAVR ALGFDDCGVS
PDERLITLAT QLAEHPLTGT RIAVQLHGHD DLTALARLTL AGADVTTVTP YRWTPATDTG
DKREQLLTAL LNGSIDVLTF TAAPVVDAFF SYVAEQSCTS HILHQLRTVT TVATVGPVTA
APLIAHGITP LIPDRFRMGA MIKLIVDHMT TDARTTIPTP HGHLTLQGNR LTLTTTDNTT
CVTLTDSQRV VMRALTHTPG NVVTRAHLGT LLGVGHTDHA LDVAISRLRT ALPDSRLIST
VIKRGYRLNV SH
|
|---|
| |