Gene Jden_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2193 
Symbol 
ID8381351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2366759 
End bp2367916 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content61% 
IMG OID645004947 
ProductDNA-directed DNA polymerase 
Protein accessionYP_003162133 
Protein GI256833406 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTGT GGGAAGAACT TGTTGGGCAA CCCTATGCGG TCAATACTCT CACTCAGGCG 
ATCACTCACC CTGAGTCCAT GACACACGCA TGGTTGATCA CTGGGCCACC CGGATCGGGC
CGTTCCGTTG CGGCCCGCGC TTTCGCGGCT GCCCTTCAAT GCCTCAACGG TGGGTGCGGG
CACTGCGCAT CGTGCACGAC GGTCCTCAAG GGACAACATC CTGATGTCAC TGTTGTCGCG
ACCGACAAAG TCACCATCGC CATCGATGAC GTGCGCGGTC TCATCAGCGA AGCAACTCGC
AGCCCTTCTC AAGGACGCTG GCGCATCATC ATTATCGAAG ACGCTGATCG CATGATGGAA
CGCACCACAA ATGTCCTGCT CAAAGCCATT GAAGAACCCC CACCACGGAC CATCTGGTTG
TTGTGCGCAC CCAGCCCCCA GGACGTCATG GTGACCATCC GCTCACGGTG CCGAAACCTT
GCGCTGCGCA TCCCACCCAT CGACGATGTG GCCCAACTCC TCATCACACG TGACGGAATT
GACCCAGCCA CCGCCCACGC GAGCGCGGCC GCCGCCCAAT CACACATCGG CATGGCACGA
CGCTACGCAA CCCACCCTGA GACTCGGCAA CGCCGCACCC ACGTCCTTGC TCTGACCGCT
CGTATCAGCA CTGTCGCCGA TGCCATCTAC GCTGCCGCTG AACTCCTCGA CACCGCCCAA
CACGACGCCC AACAAGCCAC CGCAGAACGC GACGCCCAAG AAAAAGAAGA ACTCCTGCGC
ACCCTGGGCG CAAGCGAAGC CAGAACCCTG CCACCGGCAC TACGCAGTCA CATCAAAACC
CTCGAAGACG ACCAAAAACG CCGCGCAACC CGCCACCAAC GCGACGTCCT CGACCGGTGC
ATGACTGACA TCATTTCCCT GTACCGCGAT ATCCTCCTCA CCCAAACCGG GGCTACCGCC
ACCCCCATCA ATACAGACCT CACCACCACC ATCGACGACA TCGCTCACCG CACCACCCCC
GAACACACCC TCACTGCAAT CGACGCCATT CAACGCGCTC GCCGCCGCCT CGCCGCGAAC
GTCGCCCCCC TCCTTGTCCT TGAAGCCATG TTTCTTGACA TCCGCACACC CACCACGCAC
GCCAGGAGAA CCGCATGA
 
Protein sequence
MSVWEELVGQ PYAVNTLTQA ITHPESMTHA WLITGPPGSG RSVAARAFAA ALQCLNGGCG 
HCASCTTVLK GQHPDVTVVA TDKVTIAIDD VRGLISEATR SPSQGRWRII IIEDADRMME
RTTNVLLKAI EEPPPRTIWL LCAPSPQDVM VTIRSRCRNL ALRIPPIDDV AQLLITRDGI
DPATAHASAA AAQSHIGMAR RYATHPETRQ RRTHVLALTA RISTVADAIY AAAELLDTAQ
HDAQQATAER DAQEKEELLR TLGASEARTL PPALRSHIKT LEDDQKRRAT RHQRDVLDRC
MTDIISLYRD ILLTQTGATA TPINTDLTTT IDDIAHRTTP EHTLTAIDAI QRARRRLAAN
VAPLLVLEAM FLDIRTPTTH ARRTA