| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2192 |
|---|
| Symbol | |
|---|
| ID | 8381817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 2365206 |
|---|
| End bp | 2366762 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645004946 |
|---|
| Product | TAP domain protein |
|---|
| Protein accession | YP_003162132 |
|---|
| Protein GI | 256833405 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CCCGACGACG GCCCACCCCC TTCACCGCCT TTGCCGCCAC CGCCCTTGCT
GTGACCATTG CGCTCGCAGG GTGTGCTCAA GAGGAACCGG ACAAAACGCC GACTGGGACG
ACGACGTCTT CTGACGTTGC TGGCCCTATC CCTGAGGGGT TTGACACCTA TTACACGCAG
GACGTCAGCT GGGAGTCGTG TGGAGGGGGA ACCTATGAGT GCGCGGAGGT GAGTGCCCCC
ATGGATTGGG ACGACCCTGA TTCGGAGTCC ATCTCTCTCG CGCTTCAGTT GTATAGGGCG
CGTGGCGATG CGCAAGGAAC CGTGATCCTT AACCCGGGAG GTCCCGGTGG GTCGGGTATT
GAGCTTGTCG GGTACGCCCC CATGATTTTT GGCAGCAAAC TTCTCGATAA TTACAACCTG
TTGGGGTTTG ACCCTCGTGG TGTCGGTCAG TCCAGTGCGG TGGCGTGCTA TGACACCACC
GAGATGGACC GTTACCTTGC GTTGACGATC ACGAACGTGA CTGACAAAAC GTTGCCCGTG
TACCAGGAAG AAGCAGACCG GTTCGCTGAA GCGTGCAAAG ACAACACTGG TGATCTTCTT
GGTCATGTGG ACACCATCAA CTCTGCACGC GACATGGACC TGCTGCGGGC GCTGATGGGA
GACGAGAAAC TCCATTATTT TGGGTACTCC TACGGCACCC AACTGGGGGC GACCTATGCT
GGATTGTTCC CCGAGAACGT GGGACGTATG GCGCTCGACG GGGCCATTGA CCCGCGGTTG
ACTCCGTTTG AGCAAAGTTT GGAACAAGCC CAAGGGTTTG AACATGTCAT GCGCCGGTAC
GTGGAAGACT GCCTGTCCAC CCCGGACTCC TGCCCTCTGA GCGGTGACGT GGATGATGCG
ATGGGCGAGA TCGCTGACCT TCTTGAATCC CTGACAGCGA ACCCCATGCA AACCGACGAC
CCAGAAGGGC GCGTCCTCAC CCGGTCACTG GCGTTCTACG GTCTCGCCTA CCCCATGTAC
GCGCCCATTA TTTGGCCAGA TCTCTCCAGT GCCCTGAACT TGGCGCTCCA TTCCCGTGAT
GGCTCTGAAC TACTTGACCT GTCAGACGCC TACTTCGGGC GTGAAGGCGG GCAATACACT
GACAACCAAA CGGAAGCGTT CACCGCCATT AACTGCCTTG ACTCACGAAG CGCCTCAGAC
CTTGCCACCA TGGAGAAAGA AGCGCAACAG ATCATCGCAG CAGCACCTGT GATGGGAGAG
TCCTTCACCT ACGGTGGGAT CGGGTGCGCG AACTGGCCTT ACGATGCGGT CACACCTGAC
TATGACACCA GCGCCCCCGG GGCGGCCCCC ATTCTCGTCA TCGGAACTAC GCATGACCCG
GCTACCCCAT ACAAGTGGTC TGAGGGTCTT GCTGACACAC TGGAGTCTGG TGTGCTCATC
ACCAACGAAG GCGACGGTCA CGGGGCCTAC GGGCAATCCA ACAGCTGCAT CCTCAATACG
GTGGATGACT ACTTCGTTGA CGGAACAGTG CCTGACACTG ACCCAATGTG TTCGTGA
|
|---|
| Protein sequence | MTAPRRRPTP FTAFAATALA VTIALAGCAQ EEPDKTPTGT TTSSDVAGPI PEGFDTYYTQ
DVSWESCGGG TYECAEVSAP MDWDDPDSES ISLALQLYRA RGDAQGTVIL NPGGPGGSGI
ELVGYAPMIF GSKLLDNYNL LGFDPRGVGQ SSAVACYDTT EMDRYLALTI TNVTDKTLPV
YQEEADRFAE ACKDNTGDLL GHVDTINSAR DMDLLRALMG DEKLHYFGYS YGTQLGATYA
GLFPENVGRM ALDGAIDPRL TPFEQSLEQA QGFEHVMRRY VEDCLSTPDS CPLSGDVDDA
MGEIADLLES LTANPMQTDD PEGRVLTRSL AFYGLAYPMY APIIWPDLSS ALNLALHSRD
GSELLDLSDA YFGREGGQYT DNQTEAFTAI NCLDSRSASD LATMEKEAQQ IIAAAPVMGE
SFTYGGIGCA NWPYDAVTPD YDTSAPGAAP ILVIGTTHDP ATPYKWSEGL ADTLESGVLI
TNEGDGHGAY GQSNSCILNT VDDYFVDGTV PDTDPMCS
|
|---|
| |