| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2126 |
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| Symbol | |
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| ID | 8381816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2324963 |
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| End bp | 2326150 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 645004879 |
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| Product | integrase family protein |
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| Protein accession | YP_003162066 |
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| Protein GI | 256833339 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.706316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACCA GACCAAAGGG CGCAGGCTCC CTCTACTACT CCGCCGACGG CAGATGGCGC
GGCACCATCG AAGCCGGATG GACCGCAACC GGCACCCGGC GAAGAATCAC AGTCTCCGCA
AAAACCAAAG CCGAAGCCCA ACGCAAGATG CGCGACCGCG AAAGAGAAAT CGCCCGCAAC
GGCATCCCCA CCGAAGGATC ACGACGAGCC ACCACAGTCA AAGCATGGGC AGAAGAATGG
CTACCCCTAC AAGAACGCAC ACTACGCCCA CAGTCATACG CCTCCACCCG ATCAGCCGTC
ACCAAGTGGA TAATCCCCAC CATCGGCCAC GTCAAACTCG CCACCCTCAA CCCCGGGCAC
ATCAGGTCCG TACACAACGC CGTGCGGGAC GCGGGACTCA AACCATCATC CGCTGTCCGC
ACACACGCAG TCCTCATGGC CCTACTCAAC GACGCCCTCA CCGAAGGAGG CCACACAGTC
CCCGACGCAC CCCTGAAGGT CTCCGGCCCA AAGGCAGGGA AATCCACACG CGACGCTATC
CCACTAGAAC ACGCACTCAT CGTCCTACAA GCCGCACTAG CCCGCCCGGA CGCCTCCAGG
TGGGTCGCAG CCCTCCTGCA AGCCCTGCGC CCTGCCGAAG CGCGCGGCCT CACATGGGCG
CACATCGACT TCGACGCTGA CACCATTGAC ATCTCCTGGC AGCTCAAACC CGTCCCCTAC
AAGACACCGC GTGATCGCAC GTCAGGCTTC CGCGTCCCAG ACGACTACGA AGCCACGCAC
TTGGTGGACT CTTACCACCT CGTGCGACCT AAAACCGATT CAGGGCAGCG CATCATACCA
ATGGTGCCAT GGATGAAAGC AGCCCTGCTC GCCTGGCGGG AGGCCCAAGG GGGTTCACCC
TACGACCTTG TATGGTGCCG CGCGGACGGT AGACCTCTCA CGGATAAGCA GGACGTGGCA
GCATGGCGCA CCCTCTGCGA AACGGCGGGC GTACCAGCCT ACGACCTCTA CGAAGCCCGC
CACACGGCAG CGACCCTACT ACGCAAAGCA GGCGTGGACG ACGAAACGAT TATCGCGATC
ATGGGACACG CCACCATCCT CTCCACAAAG GCTTATCTCC ACTCTGATAC TGAGCGGGCA
CGTGAAGCCC TCCAAAAAGT CGCCCAAGCC CTACAACTCG AAGCATAA
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| Protein sequence | MATRPKGAGS LYYSADGRWR GTIEAGWTAT GTRRRITVSA KTKAEAQRKM RDREREIARN
GIPTEGSRRA TTVKAWAEEW LPLQERTLRP QSYASTRSAV TKWIIPTIGH VKLATLNPGH
IRSVHNAVRD AGLKPSSAVR THAVLMALLN DALTEGGHTV PDAPLKVSGP KAGKSTRDAI
PLEHALIVLQ AALARPDASR WVAALLQALR PAEARGLTWA HIDFDADTID ISWQLKPVPY
KTPRDRTSGF RVPDDYEATH LVDSYHLVRP KTDSGQRIIP MVPWMKAALL AWREAQGGSP
YDLVWCRADG RPLTDKQDVA AWRTLCETAG VPAYDLYEAR HTAATLLRKA GVDDETIIAI
MGHATILSTK AYLHSDTERA REALQKVAQA LQLEA
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