Gene Jden_2049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2049 
Symbol 
ID8381208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2236853 
End bp2238529 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content57% 
IMG OID645004801 
Producthelicase domain protein 
Protein accessionYP_003161990 
Protein GI256833263 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATG GCCCCCTCAT TGTCCAAAGT GATAAGTCAC TCTTGTTGGA TGTGGCGCAT 
CCGCTGGCTG ATGACGCTCG CCGCGCGATC GCCCCGTTCG CAGAGTTGGA GCGGGCGCCT
GAGCATATCC ACACGTATCG GCTGACACCA TTGGGGTTGT GGAACGCGCG GGCTGCTGGC
ATGGACGCGG AGTCGGCTGT CAATGTCCTC ATCACCTACT CGCGTTTTCC AGTCCCTCAC
AGCGTGTTGG TGGACATCGC GGAAACGATG GCCAGGTACG GTCGCCTTAC CTTGATGCAC
CATCCCACCC ATGGGTTAGT TCTTCGGTCC ACTGATCCTG CAGTGTTGGC AGAAATTACT
GCTGCGGCTC GGACAAAAAA GTACTTGGGT CAGCGTGTGG ATGACGACAC GGTGGTTGTG
CACCCTTCAG ACCGGGGAAA TGTGAAGCAG GCACTGATCA AACTGGGATG GCCTGCTGAT
GATCAGGCCG GCTACGTGAA CGGTGAAGCA CACCCCATCA CGTTGACCCG TGATGATCCG
CGTACCCACA CGTCATGGGA TTTACGCCCG TACCAGCAGC ATGCGACTGA TGCGTTTACC
TCTGGTGGTT CGGGGGTTGT GGTGTTGCCG TGCGGGGCGG GGAAAACCCT CGTGGGTGCC
GCAGCGATGG CGAACATTTC CACAACAACA CTCATTTTGG TGACCAATAC TGTCTCAGCC
CGGCAGTGGC GGACTGAACT CCTTGCCCGT ACGAGCCTCA CTGAGGACGA AATTGGGGAG
TATTCGGGAA CAACAAAAGA GATTCGCCCA GTCACGATTG CGACTTATCA AGTCCTGACT
TCGCGACGCA AGGGTGCTTA CACTCACCTG GATCTGTTTG GGGCTCGCGA CTGGGGTCTG
ATCATTTACG ACGAGGTCCA CCTATTGCCG GCACCTGTGT TCCGGATGAC TGCGGACCTC
CAAGCGCGTA GGCGCCTTGG TCTGACCGCT ACCCTGGTGC GCGAGGACGG TCGGGAAGAC
GAAGTGTTCT CCCTCATTGG CCCCAAACGG TATGACGCAC CGTGGAAAGA CATTGAAGCG
CAAGGGTATA TCGCCCCGGC TGATTGCACA GAGATCAGAT TCACGTTGTC CAACGCGGAA
CGGCTGACGT ACGCCACTGC TGAACCGGAT GACAAGTATC GGTTTGCTGC GAGCGCCCCG
GCAAAAACAC ACATTGTGGA GCACATTGTG GCTCAGCATG CGGGGGAACC CACTCTTGTC
ATCGGGCAAT ATTTGGACCA GTTAGAGGAT ATTGCTCAGC GGCTTGACGC ACCGCTCATC
ACAGGGAAAA CACCGGTCAA GGAACGACAG CGGCTTTTCG ATGCGTTTCG TGCTGGGGAG
TTGACCACTC TTGTCGTGTC GAAGGTGGCG AACTTTTCCT TGGATCTGCC TGAGGCGACG
ATTGCCGTAC AGGTGTCGGG GTCGTTTGGT TCCCGGCAGG AAGAAGCTCA GCGGTTGGGG
CGCATTATGC GCCCGAAAGC TGATGGACGA CGCGCCCATT TCTACACGAT TGTGGCCCGG
GACACGGTGG ACCAAGATTT TGCAGCGCAT CGGCAGCGGT TCTTGGCGGA ACAGGGGTAT
GCGTACACGA TTGTTGATGC GGACATTGAC TCGCAGGAGT CCGCGTCGGA CACGTAA
 
Protein sequence
MTDGPLIVQS DKSLLLDVAH PLADDARRAI APFAELERAP EHIHTYRLTP LGLWNARAAG 
MDAESAVNVL ITYSRFPVPH SVLVDIAETM ARYGRLTLMH HPTHGLVLRS TDPAVLAEIT
AAARTKKYLG QRVDDDTVVV HPSDRGNVKQ ALIKLGWPAD DQAGYVNGEA HPITLTRDDP
RTHTSWDLRP YQQHATDAFT SGGSGVVVLP CGAGKTLVGA AAMANISTTT LILVTNTVSA
RQWRTELLAR TSLTEDEIGE YSGTTKEIRP VTIATYQVLT SRRKGAYTHL DLFGARDWGL
IIYDEVHLLP APVFRMTADL QARRRLGLTA TLVREDGRED EVFSLIGPKR YDAPWKDIEA
QGYIAPADCT EIRFTLSNAE RLTYATAEPD DKYRFAASAP AKTHIVEHIV AQHAGEPTLV
IGQYLDQLED IAQRLDAPLI TGKTPVKERQ RLFDAFRAGE LTTLVVSKVA NFSLDLPEAT
IAVQVSGSFG SRQEEAQRLG RIMRPKADGR RAHFYTIVAR DTVDQDFAAH RQRFLAEQGY
AYTIVDADID SQESASDT