Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2049 |
Symbol | |
ID | 8381208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 2236853 |
End bp | 2238529 |
Gene Length | 1677 bp |
Protein Length | 558 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645004801 |
Product | helicase domain protein |
Protein accession | YP_003161990 |
Protein GI | 256833263 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGATG GCCCCCTCAT TGTCCAAAGT GATAAGTCAC TCTTGTTGGA TGTGGCGCAT CCGCTGGCTG ATGACGCTCG CCGCGCGATC GCCCCGTTCG CAGAGTTGGA GCGGGCGCCT GAGCATATCC ACACGTATCG GCTGACACCA TTGGGGTTGT GGAACGCGCG GGCTGCTGGC ATGGACGCGG AGTCGGCTGT CAATGTCCTC ATCACCTACT CGCGTTTTCC AGTCCCTCAC AGCGTGTTGG TGGACATCGC GGAAACGATG GCCAGGTACG GTCGCCTTAC CTTGATGCAC CATCCCACCC ATGGGTTAGT TCTTCGGTCC ACTGATCCTG CAGTGTTGGC AGAAATTACT GCTGCGGCTC GGACAAAAAA GTACTTGGGT CAGCGTGTGG ATGACGACAC GGTGGTTGTG CACCCTTCAG ACCGGGGAAA TGTGAAGCAG GCACTGATCA AACTGGGATG GCCTGCTGAT GATCAGGCCG GCTACGTGAA CGGTGAAGCA CACCCCATCA CGTTGACCCG TGATGATCCG CGTACCCACA CGTCATGGGA TTTACGCCCG TACCAGCAGC ATGCGACTGA TGCGTTTACC TCTGGTGGTT CGGGGGTTGT GGTGTTGCCG TGCGGGGCGG GGAAAACCCT CGTGGGTGCC GCAGCGATGG CGAACATTTC CACAACAACA CTCATTTTGG TGACCAATAC TGTCTCAGCC CGGCAGTGGC GGACTGAACT CCTTGCCCGT ACGAGCCTCA CTGAGGACGA AATTGGGGAG TATTCGGGAA CAACAAAAGA GATTCGCCCA GTCACGATTG CGACTTATCA AGTCCTGACT TCGCGACGCA AGGGTGCTTA CACTCACCTG GATCTGTTTG GGGCTCGCGA CTGGGGTCTG ATCATTTACG ACGAGGTCCA CCTATTGCCG GCACCTGTGT TCCGGATGAC TGCGGACCTC CAAGCGCGTA GGCGCCTTGG TCTGACCGCT ACCCTGGTGC GCGAGGACGG TCGGGAAGAC GAAGTGTTCT CCCTCATTGG CCCCAAACGG TATGACGCAC CGTGGAAAGA CATTGAAGCG CAAGGGTATA TCGCCCCGGC TGATTGCACA GAGATCAGAT TCACGTTGTC CAACGCGGAA CGGCTGACGT ACGCCACTGC TGAACCGGAT GACAAGTATC GGTTTGCTGC GAGCGCCCCG GCAAAAACAC ACATTGTGGA GCACATTGTG GCTCAGCATG CGGGGGAACC CACTCTTGTC ATCGGGCAAT ATTTGGACCA GTTAGAGGAT ATTGCTCAGC GGCTTGACGC ACCGCTCATC ACAGGGAAAA CACCGGTCAA GGAACGACAG CGGCTTTTCG ATGCGTTTCG TGCTGGGGAG TTGACCACTC TTGTCGTGTC GAAGGTGGCG AACTTTTCCT TGGATCTGCC TGAGGCGACG ATTGCCGTAC AGGTGTCGGG GTCGTTTGGT TCCCGGCAGG AAGAAGCTCA GCGGTTGGGG CGCATTATGC GCCCGAAAGC TGATGGACGA CGCGCCCATT TCTACACGAT TGTGGCCCGG GACACGGTGG ACCAAGATTT TGCAGCGCAT CGGCAGCGGT TCTTGGCGGA ACAGGGGTAT GCGTACACGA TTGTTGATGC GGACATTGAC TCGCAGGAGT CCGCGTCGGA CACGTAA
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Protein sequence | MTDGPLIVQS DKSLLLDVAH PLADDARRAI APFAELERAP EHIHTYRLTP LGLWNARAAG MDAESAVNVL ITYSRFPVPH SVLVDIAETM ARYGRLTLMH HPTHGLVLRS TDPAVLAEIT AAARTKKYLG QRVDDDTVVV HPSDRGNVKQ ALIKLGWPAD DQAGYVNGEA HPITLTRDDP RTHTSWDLRP YQQHATDAFT SGGSGVVVLP CGAGKTLVGA AAMANISTTT LILVTNTVSA RQWRTELLAR TSLTEDEIGE YSGTTKEIRP VTIATYQVLT SRRKGAYTHL DLFGARDWGL IIYDEVHLLP APVFRMTADL QARRRLGLTA TLVREDGRED EVFSLIGPKR YDAPWKDIEA QGYIAPADCT EIRFTLSNAE RLTYATAEPD DKYRFAASAP AKTHIVEHIV AQHAGEPTLV IGQYLDQLED IAQRLDAPLI TGKTPVKERQ RLFDAFRAGE LTTLVVSKVA NFSLDLPEAT IAVQVSGSFG SRQEEAQRLG RIMRPKADGR RAHFYTIVAR DTVDQDFAAH RQRFLAEQGY AYTIVDADID SQESASDT
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