Gene Jden_2042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2042 
Symbol 
ID8381201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2229383 
End bp2230300 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content58% 
IMG OID645004794 
Productflagellar hook-associated protein 3 
Protein accessionYP_003161983 
Protein GI256833256 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID[TIGR02550] flagellar hook-associated protein 3 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.75647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTCTC GCGTCACCCA GCAGTCAGCG CAACGCAGTG TGCTGGCCAA CATGCAGAAG 
AACCTTTCCG CGATGGCCAA ACTCCAAGAG CAAGCCTCCT CAGGGAAGAA AATCGCGAAG
GTCTCCGATG ACCCAGCACG CGCATCGGAC TCGATGTCGT TACGTGCGGA ACGTGCCGCC
ACTCAGCAGT ACACTCGTAA CGCTCAGGAT GGGTTGTCGT GGTTGAACGT CATTGACTCC
TCGCTCACGT CCACTGCGTC CATGTTGCGT CGTGCCCGTG ACCTCACCGT CCAAGGGTCA
AACTTGGGAA CAATGTCAGC ACAAGCCCGC GAGGCAGTTG CCGCAGAAAT TGACGGCATC
AAAGCCGGCA TCATGGAGCA GGCGAACACC CAGTATTTGG GCCGTTCCGT GTTTGCTGGT
ACCTCAAGTG CTGGTCACGC GTTCGAAGAC ACGGGGACCG GGTACGCATT CACAGGTGCT
GCCGGCACCA GTGTGGAGCG TCGGATCGCC GCTGACGTCA CTGTCCGGGT CGACGCTGAT
GGCGCAAGCG TTTTTGGTGA CCCCACCGAA ACTGACCCAG CCTCCCCCAA CTACAACGTC
TTTGTGCTCC TTGACGACAT TGCGAACACG CTACGCACCG GTGGTGACCC GCAATCAGCG
CTCAACCAAC TGGATACACG CATCGACGCT GTTCTCAACA CGGCCACGAC AGTTGGTGCC
CGCACCAACC AGGTGGAGTC AGCAATTTCG CTGACCAGCT ACAAATCCGA AACGTTGCGC
ACAGACATTT CCTCAGTTGA GGACATTGAC CTGGCACAAA CAATCATGGA CCTCAAACTC
CAAGAAGTTG CCTACCAAAG CTCCCTCAAC GCCTCAGCAC GCGTGCTGCA GCCGACCCTT
TTGGACTTCC TGCGATGA
 
Protein sequence
MISRVTQQSA QRSVLANMQK NLSAMAKLQE QASSGKKIAK VSDDPARASD SMSLRAERAA 
TQQYTRNAQD GLSWLNVIDS SLTSTASMLR RARDLTVQGS NLGTMSAQAR EAVAAEIDGI
KAGIMEQANT QYLGRSVFAG TSSAGHAFED TGTGYAFTGA AGTSVERRIA ADVTVRVDAD
GASVFGDPTE TDPASPNYNV FVLLDDIANT LRTGGDPQSA LNQLDTRIDA VLNTATTVGA
RTNQVESAIS LTSYKSETLR TDISSVEDID LAQTIMDLKL QEVAYQSSLN ASARVLQPTL
LDFLR