Gene Jden_2028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2028 
Symbol 
ID8381187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2218393 
End bp2218725 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content56% 
IMG OID645004780 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_003161969 
Protein GI256833242 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC CAGCGATCGG CGCACTGACA AGCGCAACCG ACCCCAACGC ACTCATGGCG 
GTCACATCGA CCGGCCTTAT CACCCCGCCC GCCGGTGGGG GAACTGTATC TGACTCTACG
TTCGGGCAGA TGTTGACCAA CTCGATCGAC AACCTCCAAG GGTTGCAAGA AAAATCTCAA
GGACTCGCCG TCCAAGCGGT CACCGGAGAT TTGGATGACA TTCACGACTA CACCATCGCC
TCGACAGAAG CGAAAGTGAC ACTCGAACTG ACCGCCGCAA TCCGGAACAA AGCCGTTGAC
GCATTCAACG AGATCATGAG GATGCAAGCG TAA
 
Protein sequence
MSIPAIGALT SATDPNALMA VTSTGLITPP AGGGTVSDST FGQMLTNSID NLQGLQEKSQ 
GLAVQAVTGD LDDIHDYTIA STEAKVTLEL TAAIRNKAVD AFNEIMRMQA