Gene Jden_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1996 
Symbol 
ID8381155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2189239 
End bp2190795 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content57% 
IMG OID645004748 
ProductXanthine/uracil/vitamin C permease 
Protein accessionYP_003161937 
Protein GI256833210 
COG category[R] General function prediction only 
COG ID[COG2252] Permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATGG CGAACACCTC CTCCCAGACC ACGCAGAAAC CTCCTGCGTC CGGTTTCTCT 
GGCTTCCTTG ACCGCACCTA TCACATCTCA GAGCGAGGCT CGACGCTCGG CCGCGAAATC
CGCGGTGGGC TCGTCACCTT CTTCGCAATG AGTTACATCA TTATTTTGAA CCCGTTGATT
CTGGGGCTTA CCCCTGACTC AACGGGTGCT TTTTTGGGGG CTGAACTGGC CACCGGTGAC
CCAACAGCTG CTGGCGCTGG TATTCCCTTA ATTGCAGCTG CCACAGCGCT CATAGCGGGG
GTGTTGTCGA TCACCATGGG AGCGGTTGCT AACTTCCCCA TCGCCTTGGC GGCTGGCCTT
GGTTTGAACG CTTTGGTTGC GTACACGATC GTGAAGATGC CGGGGATGAC CTGGGTGGAC
GGGATGGGTT TGGTGGTCCT TGAGGGGATC GTCATTCTTG TCCTGGTCTT GACCGGGTTC
CGGACGGCAG TGTTTCGCGC GGTGCCAGCA GGGCTGAAGA CCGCTATCTC GGTGGGCATT
GGTTTGTTCA TTGCGTTCAT CGGGTTGGTC AATGCGGGCG TCGTGACTAC TCCGGCAATG
TTTGACTACG TACCGGGCAA CCAACCGGGA ACCCCGGTTC AGTTGGGGAC ATCCAAGTCC
ATTGATTCAT TGCCCATGCT GGTCTTCTTC TTGGGGCTTT TGGCCATCAT CATCTTGACG
GCGCGGAAGG TTCGCGGGGC GATGCTGTGG TCGATCCTTG GGGCCACGGT TCTTGCTGTC
GTGCTAGAGC AGACCTTAGA GATTGGTGCG AAGAACCAAG GGACTGGCGC TGGGGATAAC
CCGGCAGGCT GGAACCTCAA TGCTCCTGCC CTTCCTGATT CCTGGGTGCA GATTCCAGAC
TTCTCATTAC TTGGTCAGTT CTCGTTGTTT GGGTCGTTCG GCAAGATCGG GATCGTTGCG
GTCGTTCTGT TGGTGTTTTC TCTGTTGCTT GCGGACTTCT TTGACACCAT GGGCACGATG
GTCGCGGTGG GTGGTGAAGC CGGGTTGCTC GATAAGGAAG GCAACCCGCC AAACATTCAA
CGTATTCTGG TTGTCGACTC TCTGGGCGCA ATTGCTGGTG GTGCCGGGTC GGTGTCGTCG
AACACGGCAT TTATTGAGTC AGCATCTGGC GTGGGGGAGG GTGCCCGAAC AGGGCTTGCC
CCCATTGTGA CCGGGTTAGC GTTCTTGCTG TCGACGCTGT TTGCCCCGGT GGTTCAGTTG
GTGCCCTATG AGGCGGCAAC ACCGGCGCTC GTGTTTGTTG GGTTCCTCAT GATGACCCAG
GTGACAGGCA TCAAGTGGAG TGACTATGAG ATCGCCGTCC CAGCGTTCCT CACGATGATT
GTGATGCCGT TCACCTACTC GATCACCGAC GGCATTGGGA TGGGCTTCCT GGTGTGGGTC
ATCATCAAGA TTGTGAAGGG CAAGGGTCGA GAGATCCACC CACTCATGTG GGTGACCACC
GCGATGTTCA TCATTTACTT CGTGCTTGGA CCAATTCAGG ATCTGCTGGT GGGCTAG
 
Protein sequence
MLMANTSSQT TQKPPASGFS GFLDRTYHIS ERGSTLGREI RGGLVTFFAM SYIIILNPLI 
LGLTPDSTGA FLGAELATGD PTAAGAGIPL IAAATALIAG VLSITMGAVA NFPIALAAGL
GLNALVAYTI VKMPGMTWVD GMGLVVLEGI VILVLVLTGF RTAVFRAVPA GLKTAISVGI
GLFIAFIGLV NAGVVTTPAM FDYVPGNQPG TPVQLGTSKS IDSLPMLVFF LGLLAIIILT
ARKVRGAMLW SILGATVLAV VLEQTLEIGA KNQGTGAGDN PAGWNLNAPA LPDSWVQIPD
FSLLGQFSLF GSFGKIGIVA VVLLVFSLLL ADFFDTMGTM VAVGGEAGLL DKEGNPPNIQ
RILVVDSLGA IAGGAGSVSS NTAFIESASG VGEGARTGLA PIVTGLAFLL STLFAPVVQL
VPYEAATPAL VFVGFLMMTQ VTGIKWSDYE IAVPAFLTMI VMPFTYSITD GIGMGFLVWV
IIKIVKGKGR EIHPLMWVTT AMFIIYFVLG PIQDLLVG