Gene Jden_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1990 
Symbol 
ID8381149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2183254 
End bp2184372 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content60% 
IMG OID645004742 
Productphosphoserine aminotransferase 
Protein accessionYP_003161931 
Protein GI256833204 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01366] phosphoserine aminotransferase, putative 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCACA CCATCAGCAT CCCAGCGGCC CTTCTTCCCA GCGACGGCCG GTTTGGCTCT 
GGCCCATCGA AGGTTCGCAG TGAACAACTG GACGCCCTCA ACACCACAGG GCGGCACATT
CTAGGCACCT CACACAGGCA GTCTCCGGTA AAGAACCTCG TGGGACACAT CCAGTCCGGT
TTGCTGGAAA TGTTCGATGC GCCGGAGGGG TACGAAGTTC TGCTCGGCAA CGGCGGGTCC
ACTGCCCTCT GGGATGCGCT CACCTTCTCG TTCGTGCAAG ACCGCGCTGC ACACGCAGTG
TTTGGAGAGT TTGGATCCAA GTTCGCCAAC TCGACGAACA AAGCTCCCTT TCTCCAACCC
TCAGCGATCA CCACATATTC CCCAGGCGCG GCCGGGCTTC CAGAGGCCAC ACCGGATGCT
GACGTGTACG CGTGGCCACA CAACGAAACA TCAACCGGTG CGATGGCCCC CATCCACCGG
GTGAGTGACA ACGGCCTCAT GGTCGTTGAC GCAACCTCCG CGGCTGGCGG ACTCCCCGTC
GACCTCACTG CGACCGACAT GTACTACTTT GCGCCGCAGA AATCCTTCGC CGCAGATGGC
GGTTTGTGGT TGTCCTTTGC GTCGCCTGCC GCTATTGAAC GCATCGAGCG TGTTGCCGCC
ACCGAACGGT GGATTCCCGA CTTCCTCTCC CTGAGCATCG CAGTCACCAA CTCGCGCGCC
CAGCAAACCC TCAACACTCC CGCACTGGCG ACCCTTGTTC TCCTCGCAGA GCAAATCGAC
TGGTTTAACC GCAACGGGGG TCTTGCCTGG GCCACTGATC GGACAGCAAC ATCGGCGCGC
ATCATTGACC AATGGGTTGA ATCACGCTCT TATACAACCC CTTTTGTCGC CGACCTCGCT
CACCGGTCAC GGGTCGTAGC AACCATCGAC TTCTCGCAGG AGGTTGATGC CGCACGCGTC
GCTCGAGTGC TCCGCGAACA TGGGATCGTC GACATTGAGC CCTACCGCAA ACTGGGCCGC
AACCAGTTAC GTGTTGCGTT GTTCCCCGCA ATCGAACCCG CTGACGTTGA AGCACTCACC
CAGTGCATCG ACTACGTCGT CGAGGCCCTT GCCGACTAA
 
Protein sequence
MTHTISIPAA LLPSDGRFGS GPSKVRSEQL DALNTTGRHI LGTSHRQSPV KNLVGHIQSG 
LLEMFDAPEG YEVLLGNGGS TALWDALTFS FVQDRAAHAV FGEFGSKFAN STNKAPFLQP
SAITTYSPGA AGLPEATPDA DVYAWPHNET STGAMAPIHR VSDNGLMVVD ATSAAGGLPV
DLTATDMYYF APQKSFAADG GLWLSFASPA AIERIERVAA TERWIPDFLS LSIAVTNSRA
QQTLNTPALA TLVLLAEQID WFNRNGGLAW ATDRTATSAR IIDQWVESRS YTTPFVADLA
HRSRVVATID FSQEVDAARV ARVLREHGIV DIEPYRKLGR NQLRVALFPA IEPADVEALT
QCIDYVVEAL AD