Gene Jden_1964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1964 
Symbol 
ID8381124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2157430 
End bp2159148 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content59% 
IMG OID645004716 
Productglycosyl transferase family 39 
Protein accessionYP_003161906 
Protein GI256833179 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1928] Dolichyl-phosphate-mannose--protein O-mannosyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGATG ATGACGTGAA TCAGTCGGCT TTGTCCCCGG ATGTGGCACC CGCTTCTGTG 
CCGGCTTCTT CTGAGAAGTC CCCGAGTGTG GAGCCTGCTT CTGAGGCGAG CATTTCGGTT
GTGGATACCG TGGGTGAGGA ATGGCGGCAG GCTCGTTTGT CACTGTTTTC TCCGCGGGAG
TTATCGCTGT CGTCGTTGTC TCCTGGTGCA CGCCTGTGGG GGTGGTTGGG TCCACTCCTC
GTCGCGATTG TTGCCGGGGT GGCACGGTTT GTTCGGCTTG GCACTCCCCC GTCCTTGGTT
TTTGACGAAA CGTATTACGT CAAGGGCGCA TTCACCCTGC GGATGTTCGG GGTGGAGCGA
GACTGGCCCA AAGAGATTGA TGAGTCGTGG AACGCGGGCA TGCGGGACAT GTTCTTACCG
GACGCGGATT ATGTGGTGCA CCCACCGTTA GGTAAGTGGA TGATCGCAGC TGGGATGTTT
GATTCCTCGA ACGCGTTCTT TTGGCGGTTG TCCGCTGCTG TGGTGGGAAC GATCGCGGTG
TTTGTCGTGG CACGCATTGT GCGGCGGATG GTGGGGTCGA CGGGGTGGGG GATGGTCGCT
GGCGGTTTGT TCGCCATTGA TGGGGTTGCC ATTGTGCATG CCCGCACCGG ACTGTTGGAC
TCGTTTCTCA TGTTTTTTGT GGTCGTGGCG TTGGCGTTCC TTGTCCATGA CCGGTGGTTA
CGGCGGGAAC GGTTGGCACG CATGGTTGCT GGTACCGATG ACCGCGCTCT TGCCGCCTGG
GGTGGTGCTG GTCCGTGGTT GGGGTGGTCA CGGTGGCGCT GGGCTGCGGC TCTTACGTTG
GGGTTGGCGT GCGGTGTGAA GTGGTCAGGC CTATATTTTG TGGCCGTGTT CTGCGTGATG
ATTGTGTTGT GGGACGCGGG TGCCCGCCGT TCGGTGGGGA TCACACGGTG GTGGTGGGGA
GCCATCGTTC GAGATGGTAT TCCTGCCGCC TTGGTCATGT TACCGACCGT TGTTGTGGGT
TACCTGCTGT CGTGGTCAGC GTGGTTTGCC AACACATCTT CGTATAACCG GTTGTGGCAT
GAGGCGAACC CTTCCTCATT GCCGGATTGG GTGCCGGGCC CGGTGGCGGC GGTGTGGGAT
GTGGGGCGTT CGTTCGTGCA TTACCACCAG TCCATGCTCA CGTTCCACAC AGGGTTGTCG
TCAGAGCACC GGTATGAGGC GCCTGCGTGG GGGTGGCTTC TCCAGTTACG TCCCACCTCG
TTTTTTTGGG AACGTTTTGA TGAGTCAGTC TCGTGCGGCG GAGATGAGTG TGTTGCTGCG
GTGACGTCGG TGGGGAACCC GCTGATCTGG TGGCTTGGTG CGGCCTCTTT TGTGGTGTGT
TTGTGGTGGC TGGTGCGCCG AGGTGATTGG CGCGCTGGTG TGGTTGTTGC TGGGTTTCTT
GCCGGGTGGG TTCCGTGGTT GTTTTTCCCT GAGCGCACCA TATTCACGTT CTATGTCATT
GCGTTTGCGC CGTTTGTATA CATTGGGGTG GCCTATGTGG CGTTCCGGTG GTGGACGTGG
TCCACCACGG AGCGTGCGCA CGCCTGGGTG CGACCGGTTA TCGTGTTCAT CGGGGTTCTT
GTGGTCGCAT TGTCCGTGTT CTTCTACCCG GTGTGGACAG CAATTCCGGT GCCGTATGAC
TTCTGGCGGC TCCACATGTG GTTCCCCACC TGGATTTGA
 
Protein sequence
MPDDDVNQSA LSPDVAPASV PASSEKSPSV EPASEASISV VDTVGEEWRQ ARLSLFSPRE 
LSLSSLSPGA RLWGWLGPLL VAIVAGVARF VRLGTPPSLV FDETYYVKGA FTLRMFGVER
DWPKEIDESW NAGMRDMFLP DADYVVHPPL GKWMIAAGMF DSSNAFFWRL SAAVVGTIAV
FVVARIVRRM VGSTGWGMVA GGLFAIDGVA IVHARTGLLD SFLMFFVVVA LAFLVHDRWL
RRERLARMVA GTDDRALAAW GGAGPWLGWS RWRWAAALTL GLACGVKWSG LYFVAVFCVM
IVLWDAGARR SVGITRWWWG AIVRDGIPAA LVMLPTVVVG YLLSWSAWFA NTSSYNRLWH
EANPSSLPDW VPGPVAAVWD VGRSFVHYHQ SMLTFHTGLS SEHRYEAPAW GWLLQLRPTS
FFWERFDESV SCGGDECVAA VTSVGNPLIW WLGAASFVVC LWWLVRRGDW RAGVVVAGFL
AGWVPWLFFP ERTIFTFYVI AFAPFVYIGV AYVAFRWWTW STTERAHAWV RPVIVFIGVL
VVALSVFFYP VWTAIPVPYD FWRLHMWFPT WI