| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1939 |
|---|
| Symbol | |
|---|
| ID | 8381809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 2127324 |
|---|
| End bp | 2128031 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645004691 |
|---|
| Product | transcriptional regulator, Crp/Fnr family |
|---|
| Protein accession | YP_003161882 |
|---|
| Protein GI | 256833155 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCCCC ATGATGTGGA TCATTCCGTG GCGGCACGTG CAGCGTTGGT TGGGCAGGTG
CCCTTGTTTG CCCATTTACC TGCCGATGCG CTGCGTGCGA TTGCCCAGCA GGTGACGCCA
CGGTTCTTCC CGGCTCGGCA CATCCTGTAT TCCCATGGCA GTGCTGTGCA GCAGTTGTTC
GTTGTCCACA CTGGGTCAGT GAAGACTTTC CATGTCACTG CTGAGGGTCG GGAACAGGTT
CTGGATGTCC TGACTGAGGG GCAGTTCCTT GGGGAGCACA GTGTGCTCAC TCCATACACT
GCCGACCACT ATGCACAGGT TGTCGACGCA GCGGAGATTT GTGTTCTTCG TGCTTCTGAT
TTGAAGGATT TGCTCTCGGT TTACCCTGGT ATCGCCTGGG CTATGCTGGG GCATCTGTCC
ACACGGGTTC GGCACTTGGA CCGCACCGTG ACAGCGTTGG CGGGTGACAC CGCATCGGTG
CGGGTTGCCC GGTACCTTCT TGATGCCGTG CGGCATGCTG GGAGCGAGTC GTTTCGGTTG
TCTGCCGCGA AAAAAGACGT GGCGTCGTTG TTGGGGCTGA CAGCGGAAAC GTTCAGTAGG
CGGCTGACAG AACTAGAAGT TGATGGTGTC ATCACGTTGT CTGGGCAGCG CCATGTCACG
GTTGCGGACC GTGACCGGTT GGAGGGGATT GCCCTGGGTC GTTCTTGA
|
|---|
| Protein sequence | MGPHDVDHSV AARAALVGQV PLFAHLPADA LRAIAQQVTP RFFPARHILY SHGSAVQQLF
VVHTGSVKTF HVTAEGREQV LDVLTEGQFL GEHSVLTPYT ADHYAQVVDA AEICVLRASD
LKDLLSVYPG IAWAMLGHLS TRVRHLDRTV TALAGDTASV RVARYLLDAV RHAGSESFRL
SAAKKDVASL LGLTAETFSR RLTELEVDGV ITLSGQRHVT VADRDRLEGI ALGRS
|
|---|
| |