| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1806 |
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| Symbol | kgd |
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| ID | 8380970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1973055 |
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| End bp | 1976831 |
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| Gene Length | 3777 bp |
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| Protein Length | 1258 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645004560 |
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| Product | alpha-ketoglutarate decarboxylase |
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| Protein accession | YP_003161752 |
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| Protein GI | 256833025 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGTGG GCGAACCCAA CGTGTCCTCC AATGCTGAGT CAACGTCGAT CGGCACCTCA
AACACCGACT TCGGAGCCAA CGAATGGCTT GTCGACGAAA TCCGCGAGCA ATACCTCGCG
AACCCCGACT CCGTCGCACC AGAATGGCGT GAATACTTCG CCTCCGCGAC CCCCGCACCA
GCAACAACCC CCACCACCCC AGCCCCCGCC CCACGCGAGT CGCAAGCAGA ACGCGAAACC
CGCAAACAAC ACCAGGCAGC CACCGTGAGC ACACCAGAAC CCACAAGTGC CCCCAGCCCA
GAACGGCCCG TCGCGACCGC GCAGCCTGCC ACCGCACCCT ACGCAGCCCA AGCAAAACGC
GCATCGAAAG TCGTTAACGA CGACACACCC GACAACATCG AACGCCTCAA AGGCCCAGCC
GCGCGACTCA TCAAAAACAT GGAGACCAGC CTCGAGGTCC CCACCGCCAC ATCCGTGCGC
GCCATCCCCG CCAAGCTCAT GGTGGACAAC CGCATCGTCA TCAACAACCA CCTCGTACGC
ACCCGCGGTG GCAAAGTATC CTTCACCCAC CTCATCGGAT TCGCGCTCGT TGAAGCCCTC
GCTGACATGC CAGCCATGAA CGCCGGGTAC CTCGAGCAGG ACGGAAAACC CGCTGCGGTT
TATCCCGCGC ACGTCAACAT CGGTCTTGCC ATTGACATCC AAAAGCCTGA CGGCACCCGC
CAACTCCTGG TCCCGGCCAT CAAAAAGGCC GACACCATGG ACTTTGCTCA GTTTGTCAGC
GCCTATGAAG ACGTTGTCCG CCGCGCTCGC CAGGGCAAAC TCGACATTAC TGACTTCCAA
GGTGTCACCG TCTCCCTGAC GAACCCCGGC ACCATCGGAA CCGTCCACTC CGTCCCGCGC
CTCATGAAAG GCCAAGGAGC CATCATCGGG GTCGGGGCCA TGGACTACCC GGCAGAATTT
GCTGGTGCCT CCACAGAACA ACTCTCCCGC ATGGGTGTCT CCAAAGTCCT CACCCTCACC
TCCACCTACG ACCACCGCAT CATCCAAGGT GCACAGTCCG GTGACTTCCT GCGCATCATC
GCAACCAAAC TTCTGGGTGA AGACGGCTTC TACGACCGCG TGTTCCAGGC GCTACGCATC
CCCTACGAAC CCGTTCGTTG GGTACGCGAC AACACCATCA ACGCAGACGC CGAAGCGGAA
AAACCAGCGC GTATTGCCGA ACTCATCCAC TCCTACCGGT CCCGCGGCCA CCTCATGGCT
GACACAGACC CCCTCGCCTA CCGACAACGG CGCCACACTG ACCTCGACAT TCAAACCCAC
GGGTTGACCC TGTGGGACCT CGACCGAGTC TTCCCCGTCC ACGGGTTCTC CGGCCGGTCC
AAAATGTCAT TGCGCGACAT CCTCGGGATC CTCCGGGACT CTTACTGCCG GACCGTCGGC
ATCGAGTACA TGCACATCGC TGACCGCGAC CAACGCGCAT GGTTCCAAGA ACGCCTCGAA
AACCCCTACG AGCGGACTCC CCGCGAGGAA CAACTGCGGA TTCTGCGCCG CCTCAACGCT
GCAGAAGCCT TTGAAACGTT CCTGCAAACC AAGTTCGTGG GGCAAAAACG GTTCTCACTC
GAAGGAGGCG AATCGATCAT CCCGATGCTG GACGCCATTT TGTCCAGCGC CGCTGAAGGT
GGCCTCGATG AGGTGTCCAT CGGGATGGCA CACCGCGGAC GCCTCAACGT GCTCGCGAAC
ATTGCCGGAA AGAGCTACGG ACAGATCTTC GCTGAATTTG AAGGCAACCT CGACCAGCGT
ACCTACCAGG GATCTGGCGA TGTGAAGTAC CACCTCGGCA CGGAAGGGAC CTTCACCGCA
GAATCTGGGG CAACCACAAA GGTATCCCTG GCAGCAAACC CCTCCCACCT CGAAGCGGTC
AACCCCGTCC TGGAGGGGAT CGTCCGGGCA AAACAAGACC GTATCGATCT AGGCGGCGAC
GGGTTCTCCG TCCTACCAAT CCTCGTTCAC GGTGACGCCG CGTTCGCAGG ACAAGGCGTG
GTCATGGAGG TTTTGAACCT CTCCCAGCTA CGGGGATACC GCACCGGTGG CACCATCCAC
CTCATCATCA ACAACCAAGT AGGATTCACC ACCGGACCAT CAAACTCACG GTCCACCCAC
TACGCCACCG ACGTTGCCAA GGGCTACCAA GTACCCGTCT TCCACGTCAA CGGTGACGAC
CCTGAAGCTG TTGTACGCAT CGCACGGCTT GCTTTCGACT ACCGGGAACG GTTCAACCAA
GACGTCATCA TCGACATGGT GTGCTACCGC CGCCGTGGAC ACAACGAAGG TGATGACCCG
TCAATGACCC AACCGCTGAT GTACAACCTC ATTGAAGCGA AGAACTCGGT GCGTAAGCTC
TACACCGAAA CTCTCGCATC CCGTGGCGAC ATCAGCGACG AGGAAGCTGC CGAAGCTCTC
CAGGACTACC AAAACCAACT CGAACGTGTC TTCACCGAAA CACGAGAAGG CGGTTTCGTC
CCACCCGCCG ACACCGAACC TGTCGCAGGT TTGGAGCGCC CTGAGTCCCA GCGTGAAGAC
GCCGGCACCA TGGTCGGATG GCAAACAGCT GTCCCACAGT CAGTCCTTGA CCGCATTGGT
GATGCCCACA TCAACCCACC TGCCGGATTC ACCGTGCACA CAAAGCTGCG GCAACTGCTT
GATAAGCGCC ACAAAATGGT GAGTGAAGGT GGCATTGACT GGGGTTACGC CGAGATTTTG
GCGTTTGGTT CCCTCCTCAT GGAAGGAACT CCTGTTCGAC TCGCTGGGCA AGACTCTCGA
CGCGGCACCT TCGTGCAACG GCACGCGGTT CTCCACGACC GCAACACCGG GGCAGAATGG
ACTCCCCTGC TGTACTTGTC CGCCGACCAA GCAAAGTTCT GGGTCTATGA CTCATCACTG
TCCGAATATG CGTGCCTCGG ATTTGAGTAC GGGTACTCCG TGGAGCGCCC CGACGCACTC
GTGCTGTGGG AAGCCCAATT TGGCGACTTC GTCAACGGGG CTCAAACAGT GATCGACGAG
TTCATTTCCT CCGCAGAGCA AAAGTGGTCA CAGAACTCCT CAGTGGTTCT CCTCCTCCCA
CACGGGTATG AAGGACAAGG ACCCGACCAC TCCTCGGCAC GCATCGAGAG GTTCTTGCAA
CTGTGCGCTG AGAACAACAT GACGATCGCC TATCCCTCAA CTCCAGCCCA GTACTTCCAC
CTTCTGCGGC ACCAAGCGTA CGCACGCCCT CGCCGCCCGC TGGTCGTCAT GACACCAAAG
TCCATGCTTC GACTCAAAGC AGCCGCATCA ACACCCGCAG ATTTCACCTC AGGCACATTC
CGACATGTCA TTGGTGACGA CGCTGCCGCT GCACGCGCCG CCCAGGGGGG AACAATTGAC
CGCGTCGTCG TGTCCACCGG GAAAATCTCC TGGGAGCTCC TCGCCCACGC GAAGAAGACC
CACGACACCT CCACTGCTTT TGTTCGCCTA GAACAGCTTT ATCCGCTCGA TGGTGACCAA
CTCCGTGAGG CGTTGGCACC CTTTGGGGAT GCTGAAGTGG TGTGGGTCCA AGAAGAACCC
GAAAACCAGG GTGCCTGGCC ATTCCTTGCC CTGAACCTTC CCCAACTGAT AGAAGGACGC
TCCCTGCGTG TTATCGCCCG CCCTGCATCC GCATCGCCAG CAGTCGGTAT CGCCAAGGTG
CACAAAGCGG AACAAGATAG CCTGATTCAA CGAGCTTTTG ACCGCGACAA CACGTAG
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| Protein sequence | MKVGEPNVSS NAESTSIGTS NTDFGANEWL VDEIREQYLA NPDSVAPEWR EYFASATPAP
ATTPTTPAPA PRESQAERET RKQHQAATVS TPEPTSAPSP ERPVATAQPA TAPYAAQAKR
ASKVVNDDTP DNIERLKGPA ARLIKNMETS LEVPTATSVR AIPAKLMVDN RIVINNHLVR
TRGGKVSFTH LIGFALVEAL ADMPAMNAGY LEQDGKPAAV YPAHVNIGLA IDIQKPDGTR
QLLVPAIKKA DTMDFAQFVS AYEDVVRRAR QGKLDITDFQ GVTVSLTNPG TIGTVHSVPR
LMKGQGAIIG VGAMDYPAEF AGASTEQLSR MGVSKVLTLT STYDHRIIQG AQSGDFLRII
ATKLLGEDGF YDRVFQALRI PYEPVRWVRD NTINADAEAE KPARIAELIH SYRSRGHLMA
DTDPLAYRQR RHTDLDIQTH GLTLWDLDRV FPVHGFSGRS KMSLRDILGI LRDSYCRTVG
IEYMHIADRD QRAWFQERLE NPYERTPREE QLRILRRLNA AEAFETFLQT KFVGQKRFSL
EGGESIIPML DAILSSAAEG GLDEVSIGMA HRGRLNVLAN IAGKSYGQIF AEFEGNLDQR
TYQGSGDVKY HLGTEGTFTA ESGATTKVSL AANPSHLEAV NPVLEGIVRA KQDRIDLGGD
GFSVLPILVH GDAAFAGQGV VMEVLNLSQL RGYRTGGTIH LIINNQVGFT TGPSNSRSTH
YATDVAKGYQ VPVFHVNGDD PEAVVRIARL AFDYRERFNQ DVIIDMVCYR RRGHNEGDDP
SMTQPLMYNL IEAKNSVRKL YTETLASRGD ISDEEAAEAL QDYQNQLERV FTETREGGFV
PPADTEPVAG LERPESQRED AGTMVGWQTA VPQSVLDRIG DAHINPPAGF TVHTKLRQLL
DKRHKMVSEG GIDWGYAEIL AFGSLLMEGT PVRLAGQDSR RGTFVQRHAV LHDRNTGAEW
TPLLYLSADQ AKFWVYDSSL SEYACLGFEY GYSVERPDAL VLWEAQFGDF VNGAQTVIDE
FISSAEQKWS QNSSVVLLLP HGYEGQGPDH SSARIERFLQ LCAENNMTIA YPSTPAQYFH
LLRHQAYARP RRPLVVMTPK SMLRLKAAAS TPADFTSGTF RHVIGDDAAA ARAAQGGTID
RVVVSTGKIS WELLAHAKKT HDTSTAFVRL EQLYPLDGDQ LREALAPFGD AEVVWVQEEP
ENQGAWPFLA LNLPQLIEGR SLRVIARPAS ASPAVGIAKV HKAEQDSLIQ RAFDRDNT
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