| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1792 |
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| Symbol | |
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| ID | 8380956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1954953 |
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| End bp | 1956332 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004545 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003161738 |
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| Protein GI | 256833011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGG TTGACGCTGT ATCCGAGCAA CACGCTCTCA CTGAACATGT GTGGCCTCGC
AACGCCCGCC TTCACGACGG TGAATTCGTG CTGGCTGGTG TGAGCGCCAC CCAGTTAGCT
GATGAGCACG GCACCCCCGC TTTTTTCCTT GATGAGTCCG ACTTCCGGGA ACGTGCCCAA
CTTTTCCGCG ATGCGTTTCG GGCAGCGTTT TCCCCGCTGG GGGTCGACGT TGACGTGTAC
TACGCGGGAA AGGCATTCCT GTCCATCGCG GTGGCGCGCT GGGCCCATGA GGAAGGCCTG
CGGATTGACA CCGCATCGAT GGGTGAAATG GCTGTTGCCT TGCGGGCAGG TATCCCCGGC
GACCACATGG GGTTGCATGG GAATAACAAG TCCGATGAGG AACGCCGCCG GGCCATCACA
CACCGGGTGG GGCGCATCGT CATTGACTCA CCTGGTGAAA TTGATGACAT CGTTCGGGTC
GCCCGTGCCC TCGGACGCAC TGCGGCGGAC CCAGTGCCTG TTATGGTCCG GGTCACCACA
GGGATTCACG CTGGCGGGCA CGATTTCATT GCCACCGCAC GCGAAGACCA AAAATTTGGG
TTATCCCTGG CCGGCGGACA AGCGCTTGCC ACCCTCACAG CGGTCCTTGA CCACCCAGAA
CTGCACCTCC TGGGGGCACA TGCGCACATC GGTTCGCAAA TCCAAGACCC CACCGCTTTT
GAGGTGAACG CTCGCAAAAT GCTGACATTG CGTGCCGACC TTGAGCATGC AACGGGTTAC
CTCATGCCGG AGCTTGACCT TGGGGGCGGG TATGGCATTG CATACACACC AGAGGAAACA
CCAATCGATG TGCCCAACCT CGCTCAGCGG CTCGCCACCA CACTGTCCGA AGTCGCAGCA
GAACTAGGCA CAACAATCCC CCGGATCTCG ATCGAACCAG GCCGATCCAT CATTGGCCCA
GCAATGGTCA CCTGTTACCG GGTGGGCGTT GTGAAACCTG TGGTCACAGA TGAAGGCGTC
ACCCGGCTCT ATGTGTCAGT GGACGGGGGA ATGTCTGACA ACATTCGCCC CGCGCTCTAC
GGCGCCCAGT ACACGGCCCG TCTCGCGAAC CGCACCGGAA GTGAGCAAGG TGCCCTTGCC
CGCGTGGTCG GGAAACACTG TGAATCCGGG GACATCATCA TCCCTGATGT TGTCCTTCCC
GCCGACATTG GGCCCGGAGA TCTCCTCGTC GTTGCGGCAA CAGGCGCCTA CAACAGGTCC
ATGGCTTCGA ACTACAACAA CCTCCTCAAG CCGCCGGTGA TCGCGGTCCG CGAAGGGCAC
ACAACCGTCC TCGTTCGACG CGAAACCGAA GACGACCTCC TCGCCACCGA CCTGGGCTAA
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| Protein sequence | MTSVDAVSEQ HALTEHVWPR NARLHDGEFV LAGVSATQLA DEHGTPAFFL DESDFRERAQ
LFRDAFRAAF SPLGVDVDVY YAGKAFLSIA VARWAHEEGL RIDTASMGEM AVALRAGIPG
DHMGLHGNNK SDEERRRAIT HRVGRIVIDS PGEIDDIVRV ARALGRTAAD PVPVMVRVTT
GIHAGGHDFI ATAREDQKFG LSLAGGQALA TLTAVLDHPE LHLLGAHAHI GSQIQDPTAF
EVNARKMLTL RADLEHATGY LMPELDLGGG YGIAYTPEET PIDVPNLAQR LATTLSEVAA
ELGTTIPRIS IEPGRSIIGP AMVTCYRVGV VKPVVTDEGV TRLYVSVDGG MSDNIRPALY
GAQYTARLAN RTGSEQGALA RVVGKHCESG DIIIPDVVLP ADIGPGDLLV VAATGAYNRS
MASNYNNLLK PPVIAVREGH TTVLVRRETE DDLLATDLG
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