Gene Jden_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1780 
Symbol 
ID8380944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1942558 
End bp1943403 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content54% 
IMG OID645004533 
ProductATP synthase F0, A subunit 
Protein accessionYP_003161726 
Protein GI256832999 
COG category[C] Energy production and conversion 
COG ID[COG0356] F0F1-type ATP synthase, subunit a 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTGCCC TGTGCCATGA CAACCGGGAG ATTACACTGT CCATCCAAGC GACGACTCAG 
TATCTCGCCG CGTCTGGTGA CGAAGGCGGG TTCCACCCAC CCACCATCGG GGAGTTCTTT
CCGAACGCCA TCGTCGAATT CGGTTCCTTT GAGTTCAACC GCATCCACCT GGTGCGCATC
ATTGCAGCCG TCGTTCTCAT CACCCTGTTC ACACTGGCCG CACGCCGTGC GACCCTTGTT
CCAGGACGCG CTCAGAACAT CGCCGAAATG GCATTGGACT TCGTGCGAGT GAACATCGCC
GAAGAAATCC TTGGTCACAA CGCGCGCAAA TATGTTCCCA TGCTCACCAC GATGTTCTTC
GCAATTCTTG TGTTCAACAT CACTGGTGTG ATCCCACTGC TCAACATTGC AAGCACCTCA
CTCGTGGCTA TGCCCGTGGT CCTTGCACTG TGGACGTTCT TCGTTTACTT CGGAGCAGGA
GTGAAGAAAT TTGGGATCGG TGGTTACCTG AAGAACTCTT TGTTCCCCCC AGGTATTCCT
CCCTTCCTCT ACATCCTCAT CACGCCTATC GAGATTCTCC AGGTTTTCCT GTTCCGGCCG
CTCACCTTGG CTTTGCGTCT TACCGCCAAC ATGATCGCAG GGCACCTGCT CCTCGTACTC
TGCTTTGGCG CAACCCACTT CTTCTTTCTT GAAGCGGCGG GTGCCATGAA GGGACTTGCA
GTCGTGTCCT TGACCGCAGG TCTCGCGTTC ACACTTTTTG AAATCCTTGT TGCAGCACTT
CAGGCCTATG TCTTCACGCT TCTGTCTGCG GTGTACATCA GCATGGCGAT TGAAGAGGAA
CACTAA
 
Protein sequence
MLALCHDNRE ITLSIQATTQ YLAASGDEGG FHPPTIGEFF PNAIVEFGSF EFNRIHLVRI 
IAAVVLITLF TLAARRATLV PGRAQNIAEM ALDFVRVNIA EEILGHNARK YVPMLTTMFF
AILVFNITGV IPLLNIASTS LVAMPVVLAL WTFFVYFGAG VKKFGIGGYL KNSLFPPGIP
PFLYILITPI EILQVFLFRP LTLALRLTAN MIAGHLLLVL CFGATHFFFL EAAGAMKGLA
VVSLTAGLAF TLFEILVAAL QAYVFTLLSA VYISMAIEEE H