| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1729 |
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| Symbol | |
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| ID | 8380896 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1878520 |
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| End bp | 1880745 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004485 |
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| Product | 1,4-alpha-glucan branching enzyme |
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| Protein accession | YP_003161678 |
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| Protein GI | 256832951 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.844267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTAA CCCAGAACAC CCCACCTGCA CCGTTACCCA TCAGCAGTGA ACTACTCACC
GCAATCGCAC ACGGCACCCA CCACGACCCA CACACAGTAC TTGGCCCCCA TGTCCACCCC
CCGCTCAAAG CGACTGGACC CCAATGGGCG ACCGTTCGTG TCTCCCGCCC CCTGGCAACC
AGCGTCAGCC TCATCACCGC GACCGACCGT CACACCATGA CCCACGAACA CGAAGGGGTG
TGGGTCGCCG TCATCCCCGC GCCAGGTGGC AACGCCCCCG AATACCAGGT TGACACCACC
TGGGGTGACA CCACGCACAC CAGCGACGAT GGATACCGGT TCCTACCCAC CATCAGCGAA
TTTGACCTCC ACCTCATTGG CGAAGGTCGA CACGAGCAGT TGTGGACCGC ACTCGGCGCG
AACCAACGCA ACTACCCCAC ATCGTTTGGC ACCACCACCG GAACAGCCAT GGCGGTGTGG
GCTCCCACCG CCCGCGCCGT GCGTGTTATT GGTGACTTCA ACGGGTGGGA CGGGCGCGCC
CACGCGATGC GCAGCCTCGG CTCCTCCGGA ATCTGGGAAC TCTACCTCCC CGGTGTCGGC
CCCGGTGCGC CCTACAAGTT CGAGATTTAC ACTGCGGATG GGCAATGGCT CCGCAAAGCT
GACCCCCTGG CCCGCGCCAC AGAAGTTCCC CCAGCCACAG CAAGTATCGT CGCTGACGAC
ACCTACACCT GGGGTGACAA CACCTGGATG ACACGCCGCG CCACCCGCGA TCCCCACGAC
CAACCCATGT CGATCTACGA GGTGCACCTG GGTTCATGGC GACAAGGACT CAACTACCGC
GACGCCGCAC ACCAACTCAC CGAATACATC AGCGACATGG GGTTCACCCA CGTCGAGTTC
CTCCCACTAG CCGAACACCC CTTCGGTGGT TCATGGGGCT ACCAAGTCAC CTCTTACTAC
GCACCCACCT CCCGGTTTGG GAACCCAGCC GACTTCAAAT ACCTCGTCGA CACCCTTCAC
CAAGCAGGAA TCGGCGTCAT CCTTGACTGG GTGCCCGCCC ACTTCCCCAA AGACGAATGG
GCACTTGGCC GATTCGATGG CACCTGTTTG TACGAACACC CAGACCCCCA CCAAGGTGAA
CACCCTGACT GGGGAACCTA CATTTTCAAC TACGGTCGCA ACGAAGTGCG CAACTTCCTC
GTTGCCAACG CAACCTACTG GCTGGAAGAG TTCCACATTG ATGCTCTCCG CGTCGACGCG
GTCGCCTCCA TGCTCTATCT CGACTACTCA CGCGTTGACG GCCAATGGAC CCCCAACCGT
CACGGAGGAC GCGAAAACCT CGACGCAATT GCTTTCCTGC AAGAAGCCAA CGCCACCGCT
TACCGGCGAA ACCCTGGCAC CATGATGATC GCCGAAGAAT CGACGGCATT CCCCCAAGTC
ACCGCCCCCA CCCACGTTGG TGGACTCGGC TTCGGGTTCA AATGGAACAT GGGCTGGATG
AACGACACCC TGCGCTATCT CCACGAAGAA CCCGTGAACC GGCGGTGGCA CCATGGAATG
CTCACCCACA CTATTTCCTA CGCGTTCTCC GAACAGTTCC TCCTCCCCTT GTCCCACGAC
GAAGTCGTCC ACGGAAAAGG GTCACTCTTC ACAAAAATGC CTGGCGACGA CTGGCAACGG
TTCGCCAGCG TCCGCTCACT GTTCGCCTGG CAATGGGCGT ACCCCGGCAA ACAACTCCTC
TTCATGGGCA ACGAGTTCGC CCAGCGTGGC GAATGGCGTG AAGGCGGGTC CCTGGAATGG
GGATCACTCA ATGACCCGGC CCACGCACGT GTCCGCGGGC TGGTGCGCGA CCTCAATACC
CTCTACCAGA GGCACCGCGC ACTGTGGGAC AACGATCACT CCCCCGAAGG ATTCCGGTGG
CTCGAATATC GCGACTCCGA CCACAACACG GTGAGTTTCA CCCGCACCTC CCACAACGGT
GACCAGGTCG TCGTCATCGC GAACTTCGCG GGAGTCCCCC ATGAAAACTA CCGGGTCCCC
CTCCCCCACG GCGGCACCTG GCGTGAAGAA CTCAACACTG ACTCCAGCGT GTACGGCGGG
TCCGGGGTGA GTAACACATC GCCTATAGCA GCAGACAACA CCCCTTGGGG GGATGGTGCA
TCCCACTCAG CAGTGATTCG CGTCCCACCA TTAGGCGTCC TCTACCTCGT CCCAGAGTCG
CACTAA
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| Protein sequence | MALTQNTPPA PLPISSELLT AIAHGTHHDP HTVLGPHVHP PLKATGPQWA TVRVSRPLAT
SVSLITATDR HTMTHEHEGV WVAVIPAPGG NAPEYQVDTT WGDTTHTSDD GYRFLPTISE
FDLHLIGEGR HEQLWTALGA NQRNYPTSFG TTTGTAMAVW APTARAVRVI GDFNGWDGRA
HAMRSLGSSG IWELYLPGVG PGAPYKFEIY TADGQWLRKA DPLARATEVP PATASIVADD
TYTWGDNTWM TRRATRDPHD QPMSIYEVHL GSWRQGLNYR DAAHQLTEYI SDMGFTHVEF
LPLAEHPFGG SWGYQVTSYY APTSRFGNPA DFKYLVDTLH QAGIGVILDW VPAHFPKDEW
ALGRFDGTCL YEHPDPHQGE HPDWGTYIFN YGRNEVRNFL VANATYWLEE FHIDALRVDA
VASMLYLDYS RVDGQWTPNR HGGRENLDAI AFLQEANATA YRRNPGTMMI AEESTAFPQV
TAPTHVGGLG FGFKWNMGWM NDTLRYLHEE PVNRRWHHGM LTHTISYAFS EQFLLPLSHD
EVVHGKGSLF TKMPGDDWQR FASVRSLFAW QWAYPGKQLL FMGNEFAQRG EWREGGSLEW
GSLNDPAHAR VRGLVRDLNT LYQRHRALWD NDHSPEGFRW LEYRDSDHNT VSFTRTSHNG
DQVVVIANFA GVPHENYRVP LPHGGTWREE LNTDSSVYGG SGVSNTSPIA ADNTPWGDGA
SHSAVIRVPP LGVLYLVPES H
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