Gene Jden_1709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1709 
Symbol 
ID8380876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1844779 
End bp1845306 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content53% 
IMG OID645004461 
Productacetolactate synthase, small subunit 
Protein accessionYP_003161658 
Protein GI256832931 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0440] Acetolactate synthase, small (regulatory) subunit 
TIGRFAM ID[TIGR00119] acetolactate synthase, small subunit 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.529781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTC ATACCTTGTC CGTTCTCGTT GAGAACAAGC CAGGTGTTCT GACCCGTATC 
GCGGGGTTGT TTGCCCGCCG TGCGTTTAAC ATTCATTCTC TTGCTGTGGG ACCCACCGAG
CATGAGGAAC TGTCACGGGT GACCGTTGTT GTTGACGTGG ATGAGTTGCC GTTGGAGCAG
GTCACGAAAC AACTCAACAA ACTCGTCAAT GTCATCAAGA TTGTTGAACT GGAATCAACA
ACTGCTGTGC AACGCGAACT GATGTTGATC AAGGTGAAGG CTGACCATTC CTCACGGTCG
GGTGTTCTTG AGATCGTCCA GTTGTTCCGT GCGCACGTGG TCGATGTTGT TCCTGACACC
GTCGTGATTG AAGCGGTGGG GAACTCGGAA AAACTTGATG CACTGTTAGG TGCACTTGAA
CCGTATGGGA TCCGTGAAAT TGTGAAGTCT GGGGCGATTG CTATTGGGCG GGGATCCCGT
TCGATGACTG ACCGCGCCTT GGACCGCTCC TCACGGCCCA CACACTGA
 
Protein sequence
MSRHTLSVLV ENKPGVLTRI AGLFARRAFN IHSLAVGPTE HEELSRVTVV VDVDELPLEQ 
VTKQLNKLVN VIKIVELEST TAVQRELMLI KVKADHSSRS GVLEIVQLFR AHVVDVVPDT
VVIEAVGNSE KLDALLGALE PYGIREIVKS GAIAIGRGSR SMTDRALDRS SRPTH