| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1689 |
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| Symbol | |
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| ID | 8380856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1823227 |
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| End bp | 1824012 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645004441 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta- isomerase |
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| Protein accession | YP_003161638 |
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| Protein GI | 256832911 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00996308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGTATCG CAAGATTTAC AACAGGTGAC GACCCACGGT TTGGGTTCCT TCAACGTGAC
AATGACCGCG ACTACATCGC AGTTCTCAGC GGTGACCCGC TCTACACCCC CATTGCCCCC
ACCGGCGAAC GGATTGAACT AGGGGATGGG GTTCGGTTAC TTGCCCCGGT TATTCCGCGC
TCTAAGGTTA TTGGGGTGGG GCGTAACTAC GCAGATCACG TCAAAGAAAT GGGCAATGAG
ATGCCCACCC AACCGTTGCT GTTCTTGAAA CCCAACACAT CCGTGGTGGG GCCCGATGAC
CCGATTGTGT TGCCACCGTT TTCCCAGGAA GTGTCCTATG AGGCTGAACT CGCAGTGGTC
ATTGGCCGCA TGACGAAAGA TGTCACTCCT GAGAACGCCC ATCGCCACAT TTTGGGGTAC
ACAATCGCCA ACGATGTGAC GGCCCGTGAC GCTCAGCGCA CTGACGGCCA GTGGGCACGT
GCGAAAGGTT TTGATTCCTC GTGTCCTCTT GGCCCATGGA TTGACACCGA CCTCAACACC
GAAGCATTGA CGATCACGAC TACCGTCAAT GGTGAGCAAC GCCAACATGG GTCCACGGCA
GACATGATCT TTGACGTTGC CTACCTGGTG TCTTACATCT CTGAAGCGTT TACTCTCCTG
CCAGGGGACG TCATCCTCAC CGGGACTCCG GCAGGGGTTG GGACGCTCAC GCACGGTGAC
CGTGTTGAGT GTTCCATTGA CGGTCTCGGC ACGTTGTCGA ACATTGCGAT TCAACGCCAC
GCATAA
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| Protein sequence | MRIARFTTGD DPRFGFLQRD NDRDYIAVLS GDPLYTPIAP TGERIELGDG VRLLAPVIPR
SKVIGVGRNY ADHVKEMGNE MPTQPLLFLK PNTSVVGPDD PIVLPPFSQE VSYEAELAVV
IGRMTKDVTP ENAHRHILGY TIANDVTARD AQRTDGQWAR AKGFDSSCPL GPWIDTDLNT
EALTITTTVN GEQRQHGSTA DMIFDVAYLV SYISEAFTLL PGDVILTGTP AGVGTLTHGD
RVECSIDGLG TLSNIAIQRH A
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