Gene Jden_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1676 
Symbol 
ID8380844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1808926 
End bp1809117 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content62% 
IMG OID645004426 
Productribosomal protein L28 
Protein accessionYP_003161626 
Protein GI256832899 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0227] Ribosomal protein L28 
TIGRFAM ID[TIGR00009] ribosomal protein L28 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000538501 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00422618 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCTGCTA TCTGCGACGT CTGCGCCAAG GGCCCAAGCT TCGGGCACAG CATCTCGCAC 
TCGCACGTGC GCACGAAGCG CCGCTGGAAC CCAAACATCC AGCGCGTTCG CGCAATCGTC
AACGGTGCAC CCAAGCGCCT CAACGTTTGC ACCTCATGCC TCAAAGCAGG CAAGGTGACC
CGCAACATCT GA
 
Protein sequence
MAAICDVCAK GPSFGHSISH SHVRTKRRWN PNIQRVRAIV NGAPKRLNVC TSCLKAGKVT 
RNI