| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1675 |
|---|
| Symbol | |
|---|
| ID | 8380843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1807002 |
|---|
| End bp | 1808540 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 645004425 |
|---|
| Product | Dak phosphatase |
|---|
| Protein accession | YP_003161625 |
|---|
| Protein GI | 256832898 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1461] Predicted kinase related to dihydroxyacetone kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000383115 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00671011 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGGCG GTGAAGACGC AGCAGTGAGT GACCAGTGGC TCCTGACTCC TGACCACGTC
CATCAGTGGA TGAACGAGGC CGCCCAACAA CTCACCCAAG CCCGAGATGC GCTCAATCGC
GCCAATGTGT TCCCCGTCGC GGACGCAGAC ACCGGAACAA ACATGGCTGT CACCATCTCC
CACGCCGCTC GCGCAGCCCA GGCCGCAACC AGAACACAGC CACACATTGA GGCCAACGCC
CTCCTGTCAG AAGTTGCCCG CGCTGCGATG CACAGCGCCC GAGGGAACTC CGGAGCCATT
CTTGCGCAAT GGCTCAACGG ATTCGCCCAT GGTCACACCC AAGCGGGGGT GCCCGCAGCA
TGTGTCGAGG GCGCTGACAG CGCCTACCGT GCGGTCGCTG ACCCGGTGGA CGGAACCGTC
CTCACTGTCG CGCACGCCGT TGCGCGCGCC GCGAGTACAG GTGACACAAC CACTGATGCT
GCCACGCGCA TCGACAATCT CGCCGAAGTG GCCTACACGT CCTTCCTCGC CACCAACACC
CAGCTCGATG CCCTGGCAGA CCACGGTGTG CGGGACGCTG GAGCCTGCGG TTTTGTGCTC
ATCATCCAAG CGCTCGCTAC CACGATCCTC GGCCATCACC ACACCAATGG GCGCCCTACC
CCCCAAGACT TCCTCCGTGT GACCCCACCG GCACCAGACC ACCCCAACAG ACCCCACACC
ACAACGGACA CCACCACCGC TGGATATGAA GTCACCGCAC TCCTGACCTG GAACAAGCCA
CTGTCACCCA CTCAACGCCC CGGTATCGAA CGCCGCCTAA AAGACGCCGG AGACTCACTG
GTCCTTGGTC GTGGTGTATC ACCCAACGAC AGCGTCCCAT TCCACATCCA CACCGACCAC
CCAGAACGCG TCCTCAACAT CTGCGCCGAC GTGGCAGACC AGGTCAGTCA CATCGCACTT
CGTTCCCTCA CTCCGCCCCA CACCCCCGAC GCCCCCCAAC CCGTCGTGGT CCTACGCACA
CCCGTATTCG CCCGAGAACT AGCACGCACC GGTGCGCTCG TCATCCTCAC CGGAACCCAC
CACATCACCA CCGAGGAACT CACCGCACTT CTCGACGACA CACACACCAG CAACCTCCAC
ATCACCAACC GCGCAACCCA CCCGCACACC GCCGCGGCCT TCCCCCACGC CACACCACAC
CCCAACGACA TTGCACTAGC CACCCACCTC ACCCACCACG CCTGGGCGAT CGACCCCAAC
GACACACCAC CCACAACCCA CCTCACCCTC ACCCGCGACG ACAACCCCAT CACAGCGATC
ACCAACGCCC TCAACACCCT CACCGACGCC GCCCCCCAAC CCGCCACAAA CGGCACAACC
ACCATCACCA TGCTCACCGA CACGCATTAC CCCGCCCACC ACATCAGCGC GCTCACCCAC
CACCTCACCA CCCTCCACCC CACACCCCCA CACCTCACCG TCATCCCCGC CCACACCGCC
GGCACCACCG CAGACATCAC CCTCACCCGT CATCACTGA
|
|---|
| Protein sequence | MKGGEDAAVS DQWLLTPDHV HQWMNEAAQQ LTQARDALNR ANVFPVADAD TGTNMAVTIS
HAARAAQAAT RTQPHIEANA LLSEVARAAM HSARGNSGAI LAQWLNGFAH GHTQAGVPAA
CVEGADSAYR AVADPVDGTV LTVAHAVARA ASTGDTTTDA ATRIDNLAEV AYTSFLATNT
QLDALADHGV RDAGACGFVL IIQALATTIL GHHHTNGRPT PQDFLRVTPP APDHPNRPHT
TTDTTTAGYE VTALLTWNKP LSPTQRPGIE RRLKDAGDSL VLGRGVSPND SVPFHIHTDH
PERVLNICAD VADQVSHIAL RSLTPPHTPD APQPVVVLRT PVFARELART GALVILTGTH
HITTEELTAL LDDTHTSNLH ITNRATHPHT AAAFPHATPH PNDIALATHL THHAWAIDPN
DTPPTTHLTL TRDDNPITAI TNALNTLTDA APQPATNGTT TITMLTDTHY PAHHISALTH
HLTTLHPTPP HLTVIPAHTA GTTADITLTR HH
|
|---|
| |