| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1656 |
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| Symbol | |
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| ID | 8380825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1791715 |
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| End bp | 1793400 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004407 |
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| Product | ABC transporter, CydDC cysteine exporter (CydDC- E) family, permease/ATP-binding protein CydD |
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| Protein accession | YP_003161607 |
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| Protein GI | 256832880 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0161843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCCAC TCGACCCTGA CCTGCTCCGG CACACGAGCG CGGCCCGAGG ATACGTGATC
CTCACGGCCG CGCTCGGCTT CGTCACCTCA GGTCTTGTTC TTGCACAAGC TGTCCTCCTC
GCCGCGGTCC TCGCCCCGGT CATCACAGCG AATGCCACGC TGACCGATGT GCGTGTCCCG
TTGATTGCGC TTGCGTGTGT TGCTGTTGCA CGGGCGGGTG TGGCAGCGCT TCAAACCCGG
TTTGCACATC GGGCTGCGAC CCGTGTCATT GCCGGGCTTC GTCGCGACTT ATTGACCCGC
GCCCTCGCGC TTGGGCCACG ATGGCTCACT GCACCCACTG AATCTGGTAC GCGCGCCTCG
GACCTCCATA CCCTGACCAC GCGGGGGCTG GAAGATTTAC GGCCCTACAT CATCAACTAT
TTGCCTCAAC TGTTGTTGAC CGCCACTGTC ACTCCAGTCG CGTTAGTTCT GGTGTTTGGG
TTGGATATCA TCTCTGGGCT CATCATCGCG GGGACCATCC CGCTGGTGCC GTTGTTCATG
ATTCTCGTAG GCACACTGAC TCAAACATCT TCGCAACGCC GACTGGTCAC GATGTCGCGC
CTTGGTGCGC AAGTCCTTGA CCTGCTCACT GGACTTGCAA CTCTTCGTTC ATTTGGCCGC
GAGCGCGGGC CTGCTGCCCG GGTGCGAGCG CTGGGTGAGG CGTATACGCG CTCAACGATG
ACAACGCTGC GGGTGGCGTT TTTGTCGGGG ATGGTGTTGG AGTTGTTGAC GACGTTGTCC
GTTGCGTTGG TGGCGGTGGC GATGGGGCTT CGTCTTGTGT ATGGGCAGGT GGGGTTGGAG
GCTGCTCTTG CTGTGATTAT TTTGGCTCCG GAAGTGCATT TGCCTTTGCG GCAGGTGGGT
CAGCATTTTC ATGCGTCAAC GAATGGTATT GCGGCGTGGG AGCGGGCGAA AGCGGTTCTT
GATGAGCCGG TTCGGCCTCC TGGCCAGGTG TGTTTGTCTG GCCATGGTGA TGTGCGGATC
GACGTGCGTG ATGTGTCGGT TGGGTCGCCT GAGCGGGCTG TTGATGCACC TGCGGGGGTG
AGCTTCTCGG TTGAACCGGG TGTGATCACT GCGTTGCGTG GGCCTTCAGG TTCGGGGAAG
TCGACGGCCG TGTTGGTGGC TCTTGGGCTT GTTACCCCCA CTTCGGGGCG GGTGACAGTC
ACGCAAGGGG GCGTGACCAC GGATATGCCA GATGTTGAGG TGGGGACGTT GTGGCGACAT
GTGGCGTGGT TGAATCAGCG TTCACCGTTG CCTCCTGCGT CTCTTGCAGA GATTCTTGGG
GTGGCTGACC ACACTCCTGA GCGGGTGCAG CAGGCGTTGG CTGCTAGTGG GCTTGACACT
GTGGTCGCTG GTCTTGCAGC AGGGTTGGAT ACCCGGGTGG GCTACGGGGG TGTGGGGTTG
TCTGTCGGGC AGCGGCAGCG GGTTCATGTG GCTCGGACGT TGCTCAGTGA CGCTGGTGTT
GTTGTGCTTG ATGAGCCCAC TGCTCACCTT GATGCGGCAA CGGAGGAAAC GGTCATGGCT
GCAATGAAGG ATCTTCGTGA TGCTGGTCGT GCCGTGCTTG TGGTGGCGCA CCGGCCGTCG
TTGCTTTCTC TTGCGGATCG TGTGGTGGAT GTGCGGTCCT CGGTGTGGGA GAGGAGCCCG
GTGTGA
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| Protein sequence | MKPLDPDLLR HTSAARGYVI LTAALGFVTS GLVLAQAVLL AAVLAPVITA NATLTDVRVP
LIALACVAVA RAGVAALQTR FAHRAATRVI AGLRRDLLTR ALALGPRWLT APTESGTRAS
DLHTLTTRGL EDLRPYIINY LPQLLLTATV TPVALVLVFG LDIISGLIIA GTIPLVPLFM
ILVGTLTQTS SQRRLVTMSR LGAQVLDLLT GLATLRSFGR ERGPAARVRA LGEAYTRSTM
TTLRVAFLSG MVLELLTTLS VALVAVAMGL RLVYGQVGLE AALAVIILAP EVHLPLRQVG
QHFHASTNGI AAWERAKAVL DEPVRPPGQV CLSGHGDVRI DVRDVSVGSP ERAVDAPAGV
SFSVEPGVIT ALRGPSGSGK STAVLVALGL VTPTSGRVTV TQGGVTTDMP DVEVGTLWRH
VAWLNQRSPL PPASLAEILG VADHTPERVQ QALAASGLDT VVAGLAAGLD TRVGYGGVGL
SVGQRQRVHV ARTLLSDAGV VVLDEPTAHL DAATEETVMA AMKDLRDAGR AVLVVAHRPS
LLSLADRVVD VRSSVWERSP V
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