Gene Jden_1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1643 
Symbol 
ID8380812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1772332 
End bp1772940 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID645004394 
Productnicotinate (nicotinamide) nucleotide adenylyltransferase 
Protein accessionYP_003161594 
Protein GI256832867 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1057] Nicotinic acid mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain
[TIGR00482] nicotinate (nicotinamide) nucleotide adenylyltransferase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.787459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00183434 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTGATC GGCGGCGCCG AACCGGGGTA ATGGGGGGAA CGTTCGACCC TATTCACCAC 
GGGCACTTAG TAGCAGCCAG TGAAGTGGCG GCACGGTTTG ACCTTGACGA GGTCATTTTC
GTGCCCACCG GAAACCCCAC GTTCAAGCAA CATCAACAGG TGACGCCAGC CGAACACCGG
TACTTGATGA CCGTGATCGC CACTGCATCC AACCCCCGTT TCACGGTGTC TCGGGTAGAC
ATTGACCGGC CCGGGTTAAC CTACACGGTT GACACATTGC GTGACCTGCG TGAACAACGC
CCAGATGACG ACTTGTTCTT CATCACTGGT GCCGACGCAG TCGCACAAAT GCTGACCTGG
AAGGACGCCC AAGAGCTGTG GAGCATGGCC ACATTTGTGG CAGTCACACG TCCAGGGCAT
CCGCTCAGCG TGGAGGGCAT CCCCCCAGAT CGTGTGAACA TTCTTGAGAT CCCGGCGATG
GCTATTTCGT CGAGTGATTG CCGGGCCCGC GCCCGGGCGG GGTTACCAGT GTGGTATCTC
GTCCCTGATG GTGTGGTCCA GTACATCGCG AAACATGGCC TCTATCCTCG TGAGGCAGTT
GAGGTGTAA
 
Protein sequence
MGDRRRRTGV MGGTFDPIHH GHLVAASEVA ARFDLDEVIF VPTGNPTFKQ HQQVTPAEHR 
YLMTVIATAS NPRFTVSRVD IDRPGLTYTV DTLRDLREQR PDDDLFFITG ADAVAQMLTW
KDAQELWSMA TFVAVTRPGH PLSVEGIPPD RVNILEIPAM AISSSDCRAR ARAGLPVWYL
VPDGVVQYIA KHGLYPREAV EV