Gene Jden_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1641 
Symbol 
ID8380810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1770446 
End bp1770871 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID645004392 
Productiojap-like protein 
Protein accessionYP_003161592 
Protein GI256832865 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00660201 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCAGCAA CAGACCACGC CATTGACCTT GCTATCACAG CCGCACGCGC TGCGTCAGAC 
AAGAAAGCAA GCGAAATCAT TGCCCTCGAC GTGAGCGACC ACCTAGTCCT CACCGACGCT
TTCGTTATCG CGTCAGGCAA CAGCGAACGC CAAGTATCCG CAATCGTTGA CGCCGTGGAA
CGAGCACTCC ACGAAGCGGG CACCAAACTC GTGCGCCGCG AAGGAAAAGG CGACGCCCGT
TGGGTACTCC TCGACTTTGG TGACATCGTT GTTCACGTCC AACACCAGGA AGACCGCGCG
TTCTACGCGT TGGAGAAACT GTGGGGAGAC TGCCCCTCCA TTGAACTCCC AGAGGACGCA
CGCGGGGGTG ACGGCGGACC CGAGGAGGAA GAACTCGATG AGTTCGGCTT CCCCAAGAAC
TTCTGA
 
Protein sequence
MAATDHAIDL AITAARAASD KKASEIIALD VSDHLVLTDA FVIASGNSER QVSAIVDAVE 
RALHEAGTKL VRREGKGDAR WVLLDFGDIV VHVQHQEDRA FYALEKLWGD CPSIELPEDA
RGGDGGPEEE ELDEFGFPKN F