| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1600 |
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| Symbol | |
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| ID | 8380769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1723107 |
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| End bp | 1724009 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004350 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_003161551 |
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| Protein GI | 256832824 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAACCG ACACCACCAC GTCCCCCGCC CCTGCAACCC GGGTCAACAC AGGACTTGCC
CGCATGCTCA AAGGCGGGGT CATTATGGAC GTTGTCACTG CAGAACAAGC AAAAATCGCT
GAAGACGCAG GCGCAGTCGC CGTCATGGCA CTCGAACGAG TCCCCGCCGA CATTCGCGCC
CAAGGTGGCG TGGCCCGCAT GTCCGACCCC GACCTCATTG ATGGCATTAT TAACGCGGTG
TCCATCCCGG TCATGGCGAA AGCCCGAATT GGTCACTTTG TTGAAGCTCA AGTCCTCCAA
GAGCTGGGAG TTGACTACAT TGATGAGTCT GAGGTCCTCT CCCCCGCCGA CTACGTCCAC
CACATCAACA AACGTGACTT CTCTGTTCCG TTTGTTTGTG GAGCCACCAA CCTTGGTGAA
GCACTGCGCC GGATCACAGA AGGCGCTGCC ATGATCCGTT CCAAGGGTGA AGCTGGCACT
GGTGATGTGT CCGAAGCTAT GAAACACATC CGTACGATCA CCACGGAAAT CGCGCAACTC
GCGGCGCTCC CGTCCGACGA ACTGTTTGTC GCAGCTAAAG AGCTTCAAGC ACCTTACGAC
TTGGTTGTCG AGGTCGCGAA AGCTGGCCGC CTCCCCGTTG TTCTGTTTGT TGCTGGTGGT
GTAGCAACAC CGGCAGACGC GGCCATGATG ATGCAGATGG GTGCGGACGG CGTGTTTGTT
GGATCCGGCA TCTTCAAATC CGGCGATCCT GCCGCACGTG CCAAAGCAAT TGTGCACGCC
ACCACCCACT ACAACGACCC AGCAGAAATC GCACGGGTGT CACGCGGCCT TGGCGAAGCG
ATGGTGGGCA TTAACGTTGC TGATGTTCCG GCACCACACC GTCTCGCGGA GCGCGGCTGG
TGA
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| Protein sequence | MSTDTTTSPA PATRVNTGLA RMLKGGVIMD VVTAEQAKIA EDAGAVAVMA LERVPADIRA
QGGVARMSDP DLIDGIINAV SIPVMAKARI GHFVEAQVLQ ELGVDYIDES EVLSPADYVH
HINKRDFSVP FVCGATNLGE ALRRITEGAA MIRSKGEAGT GDVSEAMKHI RTITTEIAQL
AALPSDELFV AAKELQAPYD LVVEVAKAGR LPVVLFVAGG VATPADAAMM MQMGADGVFV
GSGIFKSGDP AARAKAIVHA TTHYNDPAEI ARVSRGLGEA MVGINVADVP APHRLAERGW
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