| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1550 |
|---|
| Symbol | |
|---|
| ID | 8380719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1666735 |
|---|
| End bp | 1667754 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645004300 |
|---|
| Product | heat-inducible transcription repressor HrcA |
|---|
| Protein accession | YP_003161501 |
|---|
| Protein GI | 256832774 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
|---|
| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGCTG AACAACGTCG ACTGGAAGTG CTCCGTGCCA TCGTCGAGGA CTACGTGAGC
ACCCGTGAGC CGGTCGGCTC TAAACTCATT GCTGAACGTC ACGGACTTGG GGTGTCGCCA
GCCACCATTC GCAACGACAT GGCCATCCTC GAAGATGCCG GACTGATCGC CCAACCACAC
ACATCAGCGG GTCGTATTCC CACTGACCTC GGTTACCGGG TCTTTGTTGA CAAACTCTCC
GACGTCAAAC CGCTCTCTGG TGCAGAGCGC AATGCTATTC ACATGTTTCT CGACAGTGCG
GTGGACCTGG ATGACGTCGT CCACCGTGCC GGACGCTTGC TGGCACAAAT TACCGGGCAA
GTGGCAGTCG TGCAATACCC ATCACTTCGC AAATCTACCG TCCGACACTT GGAACTGGTA
AGGCTGCACC CCACACGCGT GCTTCTGGTG ATCATCACGG ACACTGGGCG GGTCGAACAA
CGCCACATCG ACATCGACCC CAGCATTAGC GAAGACGACA TCGCCTCCAT GCGTGGCGCA
CTCAACGCAC ACGCGGTCGG CAAGAGGCAA CCAGACGTCA GCGACGACTT GAACTGTGCA
TCAGAACAAT TCGCCGGCCC ACTTGCTGAC ATCTTTCACG CGATCGTTGA CCTACTGACC
GCCACCCTCG ACGAAGACAA CGACGAACGT CTTGTCCTGG CGGGAACCTC CAACCTCACC
CGCAACGGTA TTGTGCTCAC CCAGCTCAGG CCCATCCTTG AAGCACTGGA AGAACAGGTG
GTCCTCCTCA AACTCCTCAC TGAAGTGGCG GAAGACTCCG GGGCTGTGAC CGTGCGTATC
GGAAGCGAAA CTCAAGTCGA CACCCTCAAG GAAACTTCTG TCATTACCAC CCATTACGGA
TCGAACAGCA ACACACTAGG GGCACTCGGG TCTATTGGAC CCACCGGGAT GGACTACCCA
GGCACCATAG CAGCAGTCCG TGCTGTAGCC CGCTACCTCT CCCGGATCTT GTCTCACTAA
|
|---|
| Protein sequence | MHAEQRRLEV LRAIVEDYVS TREPVGSKLI AERHGLGVSP ATIRNDMAIL EDAGLIAQPH
TSAGRIPTDL GYRVFVDKLS DVKPLSGAER NAIHMFLDSA VDLDDVVHRA GRLLAQITGQ
VAVVQYPSLR KSTVRHLELV RLHPTRVLLV IITDTGRVEQ RHIDIDPSIS EDDIASMRGA
LNAHAVGKRQ PDVSDDLNCA SEQFAGPLAD IFHAIVDLLT ATLDEDNDER LVLAGTSNLT
RNGIVLTQLR PILEALEEQV VLLKLLTEVA EDSGAVTVRI GSETQVDTLK ETSVITTHYG
SNSNTLGALG SIGPTGMDYP GTIAAVRAVA RYLSRILSH
|
|---|
| |