| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1545 |
|---|
| Symbol | |
|---|
| ID | 8380714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1662742 |
|---|
| End bp | 1663197 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645004295 |
|---|
| Product | protein of unknown function UPF0054 |
|---|
| Protein accession | YP_003161496 |
|---|
| Protein GI | 256832769 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTATTG AAGTCAACAA CGAAACCACC CACCAACTCG ACGAAGCCGA GTTTGCGGAA
CTTGCGCGAT ACGTCTTTGA TGCCATGCAC ATCCACCCCC TCACGGAACT CTCAGTGGTG
TTTGTTGATC CTGACACGAT CAGTGAACTG CACGAACAGT GGATGGATAT CCCTGGTCCC
ACCGATGTGT TGTCATTCCC CATGGATGAA TTGCGCCCAG GGACAACCGA GCGGCCCACC
GAACAGGGGA TCCTTGGGGA CATTGTGATC TGCCCTGAGG TGGCAGTGGA TCAAGCAGCT
CAGGCTGGTC ACTCGCCGAT CGAAGAGATG CTTCTTCTTG CTACCCATGG GATTCTCCAT
CTTCTTGGCT ATGATCATGC TGAACCAGAA GAGGAACGGG AAATGTTCTC CCTGCAACGC
CACCTCCTCC TCACGTTCCT GGCAGGGCGG CAGTAG
|
|---|
| Protein sequence | MSIEVNNETT HQLDEAEFAE LARYVFDAMH IHPLTELSVV FVDPDTISEL HEQWMDIPGP
TDVLSFPMDE LRPGTTERPT EQGILGDIVI CPEVAVDQAA QAGHSPIEEM LLLATHGILH
LLGYDHAEPE EEREMFSLQR HLLLTFLAGR Q
|
|---|
| |