Gene Jden_1351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1351 
SymbolalaS 
ID8380528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1446235 
End bp1448922 
Gene Length2688 bp 
Protein Length895 aa 
Translation table11 
GC content58% 
IMG OID645004100 
Productalanyl-tRNA synthetase 
Protein accessionYP_003161310 
Protein GI256832583 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0013] Alanyl-tRNA synthetase 
TIGRFAM ID[TIGR00344] alanine--tRNA ligase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCG CTGAGATTCG CCATCGCTGG CTGCAGTTTT TCGAAAGTCG CGACCACCAC 
GTTGTGCCGT CAGCGTCGTT GATCTCACCT GACCCATCTG TCCTTTTCAC GATCGCGGGT
ATGGTTCCCT TCATTCCCTA CATGCTGGGA GAACAGAAGG CGCCGTGGCC GCGTGCAACG
TCGGTGCAAA AGTGTATCCG AACCGGTGAC ATCGATGAGG TCGGAAAGAC TACTCGTCAC
GGGACGTTCT TTCAGATGAA CGGGAACTTC TCCTTCGGTG ACTACTTCAA ACGTGAAGCA
ATCACCTTCG CGTGGGAGTT CATCACGGGG TCTGAAGAAT CCGGGTGCCT GGGTTTTGAC
CCCGAATTGA TCTGGGTGAC TGTCTACCAC GACGATGACG AGGCAGCGTC GCTGTGGCGT
GACGTTGCTG GGCTACCCGA GGAACGAATC CAACGCCGCG GGAAGAAAGA TAACTTCTGG
CACACCGGTC AACCGGGCCC TGGTGGGCCG TGCTCGGAGA TTTACGTTGA CCGTGGTCCA
CAGTATGGCG CCGAAGGTGG TCCTGTCGTT GATGAAGACA GGTATCTGGA AATCTGGAAC
CTCGTGTTTA TGCAGTACTC GTTGGAGAAT GTGACCTCCA AGGAGAGCTT CGACATTGTC
GGTCCGCTAC GCCAGCACAA CATTGACACC GGTATGGGGC TTGAGCGAGT TGCTCTCCTC
AAGCAGGGCG TCAACAACAT GTACGAAATT GATGAGGTGT ACCCGGTTAT TGAGGCAGCA
GAGAAGCTGT CAGGGCGCAC CTATGGTGAA AACAACGATG ATGATGTGCG GTTCCGAGTG
GTTGCAGACC ACATCCGGTC CTCACTCATG CTTATTGGTG ACGGCGTTCG CCCGTCGAAC
GAGGGCCGTG GCTACGTGCT ACGACGCTTG TTGCGTCGCT CGATCCGGGC GATGCGCCTG
TTGGGTGTGA CAGAACCTGC AATTCCTGCT CTCATCACCG CGTCGAAAGA GGCGATGAAA
GCGTCGTACC CCTACCTGGA GGAGAATTTC GCCACGATCC TCGCGACCGC GTCGACCGAG
GAGGACGTGT TCCGACGGAC GCTGAACCAG GGGCTCACGA TCTTGGATGC TGCCGTCTCG
GATGCGAAAT CACAGGGTGG TTCCTCTGCC GCTCTCACTG GTGAACAGGC GTTTACGCTG
CATGACACCT ACGGGTTCCC CATTGATTTG ACGTTGGAAG TTGCCGCGGA GCAAGGCGTC
AGTGTTGACG AGACGGCTTT CCGTTCCCTG ATGCAGGAAC AACGGGACCG GGCTCGGGCG
GATGCTTTAG CGAAGAAACA AGGCCATGGT GACTTGGGTG TTTACCAGTC CCTGCTTGCG
TCGATGGCTG CTCCTGTGGA GTTTTTGGGT TACACCGATG CTCAGGCTCC TGCGAAAGTG
ACGGCGTTGC TCGTCGATGG TCAGCCCGTG GCGACGGTGA CAGCTCCAGC AGACGTTGAG
ATCGTTCTGG ACCGAACTCC GTTCTACGCT GAAAAGGGTG GTCAGCTTGC TGATCATGGG
CGGGTGTACT CCGAGCAGGG GGCCACTGTC GACATTGCTG ATGTTCAGTC ACCTGTCAGC
GGGTTGTCTG TGCATCGTGG TGCCCTGGTC GATGGCACGT TGAGTGTCAG TGATGCGGTT
GTTGCTGAGA TCGATGTGGT GCGTCGACGT CAGATTTCCC AGGCACATAC AGCTACGCAC
ATGATCCATA AGGCGTTGCA GGAAACCTTG GGTGCGGACT CGACTCAGGC TGGGTCAGAG
AACTCACCGA ACCGAATCCG GTTCGATTTC CGGCAGAGCC AAGCTGTTCC GACATCTGCA
CTGGCTGAGA TCGAGGGACG CGTCAACGAC CAGCTTCGTG AGAACCTCGA GGTGACAGAT
ATTGTGACGT CGCTTGATGA CGCGCGTGCC ATGGGCGCGA TGGCGTTGTT CGGTGAGAAG
TATGGTGACC GGGTTCGTGT TGTGTCCATT GGTGGTGACT GGTCTCGCGA GTTGTGTGCG
GGGACGCATG TTCCAACCTC CGGTGAGTTA GGGATTGTCA CAATCCTTGG GGAAGCCTCG
ATTGGCTCAG GGGTCCGGCG CGTCGATGCT CTTGTGGGTG CGGGTGCTTA TGGTCATCAT
GCTCGTGAGC GTGCATTGGT GTCTCAGCTG TCTGGGTTGC TGAATGTGCG TTCGGAGGAG
CTTCCTACTC GTGTTGAGTC GCTGGTGGGT AAGCTGCGTG ATGCGGAGAA GGAACTCACA
ACTTTGCGGC AGGCACAGTT GCTGGCGCGC GCTGGTGAGA TTGCGAGTTC AGCAGCGACC
GTGGGTGCTG TTCGTGTCGT GACGTATGAC GCGGGTGAGG TTGCTACTCC CGATGCACTG
CGAACCTTGG TTCTCGACGT GCGGGGCCGT TTGGGTGACT CTCAGGGCTC TGTTGTGGCG
GTTGCTGGTG TGTCGAAGGG CCGCCCTGTT GTTGTCATTG CGACTAACGC GTCGGCTCGC
GAGGCGGGTG TGAAGGCTGG TGCTTTGGTG CGTACTGCAG CTGGAGTGCT AGGTGGTGGC
GGTGGTGGGA AAGATGACCT CGCCCAGGGT GGTGGGCAAA ACCCGACCGC GATCACCGAA
GCCCTTGCTG CGGTGTCCCG TGATGTAGCG TCCGTTCAAG GGGCGTAG
 
Protein sequence
MRTAEIRHRW LQFFESRDHH VVPSASLISP DPSVLFTIAG MVPFIPYMLG EQKAPWPRAT 
SVQKCIRTGD IDEVGKTTRH GTFFQMNGNF SFGDYFKREA ITFAWEFITG SEESGCLGFD
PELIWVTVYH DDDEAASLWR DVAGLPEERI QRRGKKDNFW HTGQPGPGGP CSEIYVDRGP
QYGAEGGPVV DEDRYLEIWN LVFMQYSLEN VTSKESFDIV GPLRQHNIDT GMGLERVALL
KQGVNNMYEI DEVYPVIEAA EKLSGRTYGE NNDDDVRFRV VADHIRSSLM LIGDGVRPSN
EGRGYVLRRL LRRSIRAMRL LGVTEPAIPA LITASKEAMK ASYPYLEENF ATILATASTE
EDVFRRTLNQ GLTILDAAVS DAKSQGGSSA ALTGEQAFTL HDTYGFPIDL TLEVAAEQGV
SVDETAFRSL MQEQRDRARA DALAKKQGHG DLGVYQSLLA SMAAPVEFLG YTDAQAPAKV
TALLVDGQPV ATVTAPADVE IVLDRTPFYA EKGGQLADHG RVYSEQGATV DIADVQSPVS
GLSVHRGALV DGTLSVSDAV VAEIDVVRRR QISQAHTATH MIHKALQETL GADSTQAGSE
NSPNRIRFDF RQSQAVPTSA LAEIEGRVND QLRENLEVTD IVTSLDDARA MGAMALFGEK
YGDRVRVVSI GGDWSRELCA GTHVPTSGEL GIVTILGEAS IGSGVRRVDA LVGAGAYGHH
ARERALVSQL SGLLNVRSEE LPTRVESLVG KLRDAEKELT TLRQAQLLAR AGEIASSAAT
VGAVRVVTYD AGEVATPDAL RTLVLDVRGR LGDSQGSVVA VAGVSKGRPV VVIATNASAR
EAGVKAGALV RTAAGVLGGG GGGKDDLAQG GGQNPTAITE ALAAVSRDVA SVQGA