| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1321 |
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| Symbol | |
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| ID | 8380498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1413505 |
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| End bp | 1416834 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645004070 |
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| Product | carbamoyl-phosphate synthase, large subunit |
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| Protein accession | YP_003161280 |
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| Protein GI | 256832553 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.149141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGCA GAACAGACAT CACCTCCGTC CTCGTCATCG GATCAGGGCC CATCGTCATT
GGACAAGCCT GCGAATTTGA CTACTCCGGA ACCCAAGCCT GCCGCGTCCT CAAAGAGGAA
GGCCTCCGCG TCATCCTGGT GAACTCCAAC CCCGCCACCA TCATGACGGA CCCCGAGTTC
GCTGACGCTA CCTACATCGA ACCCATCACC ACAGACGTCC TTCGCTCAAT CATCGCCAAA
GAGCGCCCCG ACGCGATCCT GCCCACCCTT GGCGGGCAAA CCGCGCTCAA CGCAGCTATC
GCCCTGGACG AAGCCGGGAT CCTCGAGGAA TTCAACGTCG AACTCATTGG CGCCAACATT
GCCGCCATCC AACGTGGCGA AGACCGAGAA GAATTCAAAA AAGTTGTTGA CACCTGCGGG
GGAGAATCCG CACGCTCTGC AATCGTCCAC TCACTGAACG AAGCCAAAGC TGCCGCAGAA
GAACTGGGCT ACCCCGTTGT GGTTCGCCCC TCCTTCACCA TGGGCGGACT CGGCTCAGGG
ATCGCCTACA CCGAACAAGA CCTTGAACGC ATCGCTGGAG CGGGGCTGCA CTACTCGCCC
ACAACAGAAG TTCTCCTCGA AGAATCCATC CTTGGATGGA AAGAATACGA ACTCGAACTC
ATGCGCGACA AAAACGACAA CGTCGCCGTG ATCTGCTCGA TCGAAAACGT TGACCCAGTC
GGTGTGCACA CCGGTGACTC AATCACTGTC GCCCCTGCAC TGACCCTCAC TGACCGCGAA
TACCAAAAAC TGCGCGACAT CGGGATCGCC GTGATCCGCG AAGTTGGCGT TGACACCGGA
GGGTGCAACA TCCAATTCGC TGTTGACCCC GACACCGGAC GGATCATTGT GATCGAAATG
AACCCCCGCG TGTCACGCTC TTCAGCGTTG GCATCTAAAG CCACCGGGTA CCCGATCGCA
AAAATTGCCG CGAAAGTCGC CATTGGGTAC ACCCTCGATG AAATCACCAA CGACATCACT
GGCACCACAT CAGCGGCATT CGAACCCACC ATCGACTACG TGGTTGTGAA AGTTCCCCGC
TTCGCATTCG AAAAATTCCC CGCCGCGGAC GACACCCTCA CCACCACCAT GAAATCGGTG
GGCGAAGCGA TGGCCTTGGG CCGAAACTTC ACCGAAGCAC TAGGCAAAGC CCTGCGGTCC
ATCGACAAAT CAGGGACCAA CTTCCACTGG GAAGGTGAAC CAGCCAGCGG TGAAGAACTT
GCCGGACTCC TGGCTGACAT CACCCGCCCA ACCGACCAAC GCATCGTCAA GGTCCAGCAA
GCTCTGCGTG CGGGAGCAAC CATCGAACAA GTCTTTGACG CCACAAAAAT TGACCCCTGG
TTCCTCGACC AAATCCAACT GATGAACGAG GTAGCACACC GGGTCGCCAC TGCACCTGCA
CTCACCCGTG ACCTGCTATG GGAAGCTAAA CGACACGGGC TGTCCGACGC ACACATCGCC
ACACTGCAAC GCGTCAAAGG CTCACGTGTC TCCGCAGAAA CAGCGGTACG AGAAGTGCGC
CGTGCGCTAG GTGTACGCCC GGTATACAAA ACGGTCGACA CCTGCGCCGC AGAGTTTCCC
GCGCAAACCC CCTACCACTA CTCAACCTAC GAAGAAGAAA CCGAAGTTGC TCCCCGCGAG
CGCGAAGCAG TCATCATCTT AGGGTCGGGG CCCAACCGAA TTGGGCAGGG GATTGAGTTT
GATTACTCGT GTGTGCATGC GGCGTTAGCG TTGAAGGGCG AGTATGAGAC GATCATGGTT
AACTGCAACC CGGAAACAGT GTCGACTGAC TATGACACGG CAGACCGGTT GTATTTTGAG
CCGTTGACGT TTGAAGATGT GCTGGAAATT TATGAGGCTG AGCTGGCTGC AGGTCCTGTG
AAGGGCATGA TTGTGCAGTT GGGTGGGCAA ACGCCGTTGT CGTTGGCTGC ACGGTTAGCG
GAGGCGGGGA TCCCGATTTT GGGGACGTCA CCGGCAGCGA TTGATGCGGC TGAAGATCGA
AGCGAGTTTG GGCGGGTTCT GACTGAAGCG AACTTGCCGG CGCCGGCTTA TGGTACGGCG
ACTACTCTTG GGCAGGCGCA GGAGATTGCT GAGCGCATTG GGTACCCGGT GCTTGTGCGG
CCATCGTATG TGTTGGGTGG TCGTGGGATG GAGATTGTGT ACTCCCATGG GCAGTTAGCT
GATTATGTGC AGCGTGCATT GGGGGAAGCT GCGTTGTCGG GTGGCCCGTT GGCACCGATT
TTGATTGACC GGTTCCTTGA CGATGCGATG GAAATTGACG TTGACGTGCT GTTCGATGGT
GTGGACATGT ATGTGGGCGG CATTATGGAG CACATTGAGG AGGCAGGGAT TCACTCGGGG
GACTCGGCGT GTGTGTTGCC GCCCGTGTCG TTGTCTGACG CCGAGATTGA CCGGATTGTT
GCCTCCACTC GGGCGCTTGC GCAGGGGATT GGGGTGCACG GGTTGATGAA TGTGCAGTTC
GCGTTGGCTT CGGGTGTGTT GTATGTGTTG GAAGCAAACC CTCGTGCGTC GCGTACGGTT
CCGTTTGTTG CCAAGGCCAC GGGTGTTCCG TTGGCGAAAG CTGCAGCGTT GGTCATGGCA
GGCCAGAGCA TCGCGTCGTT GCGCGCACAG GGGGTGTTGC CGGCTCACGG TGATGGTGCG
CACCTGTCTA TTGATGCGCC CATTGCGGTG AAGGAAGCGG TCCTTCCCTT TAAACGTTTC
CGTACGGAAT CAGGTCAAGC CGTTGACACA GTCCTTGGCC CTGAGATGCG TTCCACTGGT
GAGGTTATGG GGTTTGATAT GGACTTCCCC ACGGCGTTTG CCAAGTCACA GGCTGCCGCT
TTTGGTGGGT TGCCAACCTC GGGGCGGATG TTCGTGTCAG TGGCAGACCG GGACAAGCGT
CAGATTGTGT TCCCGATCAA ACGGGTCGCG GAGCTTGGAT TTGAGATTCT TGCTACTGCA
GGGACAGCGA AGGTGTTACG GCGTGCAGGG ATTGCGGCAA CCGAGGTGCG CAAACACTCG
CAAGGCCCAG GTGAAGATGG AGAACCAACG ATTGTGGATC TCATCACCCG TGGTGAAATC
GATATTGTGT TTAACAGCCC TTCTGGTCAG GGTGCCCGCG CGGATGGGTA TGAGATTCGT
GCGGCTGTGA CAGCTGCTGA CAAGCCCATT ATTACCACGG TGCAGCAGTT GTCTGCGGCG
GTGCAGGCCA TTGAAGCCAT TAAGAGCGGT CCCTTCACCG TGACATCTAT TCAGGAGCAC
GCTGGTGCGA CGCTTGGTGG CATGAAGTGA
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| Protein sequence | MPRRTDITSV LVIGSGPIVI GQACEFDYSG TQACRVLKEE GLRVILVNSN PATIMTDPEF
ADATYIEPIT TDVLRSIIAK ERPDAILPTL GGQTALNAAI ALDEAGILEE FNVELIGANI
AAIQRGEDRE EFKKVVDTCG GESARSAIVH SLNEAKAAAE ELGYPVVVRP SFTMGGLGSG
IAYTEQDLER IAGAGLHYSP TTEVLLEESI LGWKEYELEL MRDKNDNVAV ICSIENVDPV
GVHTGDSITV APALTLTDRE YQKLRDIGIA VIREVGVDTG GCNIQFAVDP DTGRIIVIEM
NPRVSRSSAL ASKATGYPIA KIAAKVAIGY TLDEITNDIT GTTSAAFEPT IDYVVVKVPR
FAFEKFPAAD DTLTTTMKSV GEAMALGRNF TEALGKALRS IDKSGTNFHW EGEPASGEEL
AGLLADITRP TDQRIVKVQQ ALRAGATIEQ VFDATKIDPW FLDQIQLMNE VAHRVATAPA
LTRDLLWEAK RHGLSDAHIA TLQRVKGSRV SAETAVREVR RALGVRPVYK TVDTCAAEFP
AQTPYHYSTY EEETEVAPRE REAVIILGSG PNRIGQGIEF DYSCVHAALA LKGEYETIMV
NCNPETVSTD YDTADRLYFE PLTFEDVLEI YEAELAAGPV KGMIVQLGGQ TPLSLAARLA
EAGIPILGTS PAAIDAAEDR SEFGRVLTEA NLPAPAYGTA TTLGQAQEIA ERIGYPVLVR
PSYVLGGRGM EIVYSHGQLA DYVQRALGEA ALSGGPLAPI LIDRFLDDAM EIDVDVLFDG
VDMYVGGIME HIEEAGIHSG DSACVLPPVS LSDAEIDRIV ASTRALAQGI GVHGLMNVQF
ALASGVLYVL EANPRASRTV PFVAKATGVP LAKAAALVMA GQSIASLRAQ GVLPAHGDGA
HLSIDAPIAV KEAVLPFKRF RTESGQAVDT VLGPEMRSTG EVMGFDMDFP TAFAKSQAAA
FGGLPTSGRM FVSVADRDKR QIVFPIKRVA ELGFEILATA GTAKVLRRAG IAATEVRKHS
QGPGEDGEPT IVDLITRGEI DIVFNSPSGQ GARADGYEIR AAVTAADKPI ITTVQQLSAA
VQAIEAIKSG PFTVTSIQEH AGATLGGMK
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