| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1292 |
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| Symbol | |
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| ID | 8380469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1379902 |
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| End bp | 1382754 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645004041 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003161251 |
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| Protein GI | 256832524 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4581] Superfamily II RNA helicase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.459724 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCCGA AACGCTCACG GGTCCGTGAA CAGCGAAAAA AAGAAGCCCA AGCTGTCGAG
CAACCACACC CTGAACAGGA ATTGAGCCCT GCGCAACGGT ACGCTCACCA CCAACGCACT
CGTGCATACC CCCACCTGTC ACACTTCGCC ACAACACTGG ACTTCCCTTT GGATGAATTC
CAGCATCAGG CATGTGAACA CCTCGAAAAA GGGGACGGTG TTTTGGTTGC AGCTCCCACA
GGAGCGGGGA AAACCATCGT GGGGGAGTTC GCGGTTCACC TCGCCCTTCA ACAACACCGC
AAAGCGTTTT ACACCACCCC CATCAAAGCG CTCTCGAACC AGAAATTTCA CGACCTTCAA
CGTGTCCACG GTCCGCACAA CGTTGGATTG CTCACTGGTG ATGCGACAAT CAACGGCGAA
GCACCCATTG TTGTGATGAC CACAGAGGTG CTGCGCAACA TGATTTACGC GCAGTCCACC
ACGCTCGATA ATGTTGGCTA CGTCATCATG GATGAAGTCC ACTACCTTGC TGACAGGTTT
CGCGGCGCAG TGTGGGAAGA AGTCATCATC CACCTCGACC GGTCGGTGCA ACTCGTCTCG
CTGTCTGCCA CGGTATCCAA CGCGGAGGAG TTCGGGGACT GGCTCGCCGC AGTACGCGGT
TCAACCGCTG TCATCGTTTC TGAGCGACGT CCCGTTCCAC TATGGCAACA CGTAATCACC
CAAGGGCGGT CAGACAGCCC CGGTGGCCTC ATTGATTTGT ACGCTCACAC CGTCGACCCC
ACTGATCCTG GTCCCACGCC GCCCATCAAC CCTGACCTTC TCAACACCAT GCGACGAGGC
CGAGACTCAG GACCCCGCCA GCCACGACGA GGGCGCCCTC AGCATTCAGG TCGTCGAGGA
CCACCACGTT TCGCAGTCAT CAATGAGCTT GCTGAAGCAG ACCTCCTTCC CGCGATTTAT
TTCATTTTCT CTCGTGCGGG GTGTAACGCA GCAGTGGAAC AATGCCTTGC CACAGGCATT
ACGCTGACCA CAGAAACCCA AGCACGCCAG ATTCGCATCA TTGTTGAATC ACGTGTCGCC
TCCGTTCCAC CAGAAGACCT GTCAGTCCTT GGGTTTCACG GGTGGCTTGA TGGTCTGACC
CGTGGAATCG CTGCCCACCA CGCTGGCATG CTTCCCTTGT TTAAAGAAGT GGTCGAAGAA
CTCTTCTCGC GTGGTCTGAT CAAAGTTGTG TTTGCCACTG AAACACTTGC TTTAGGCATC
AATATGCCTG CCCGCACCGT TGTTCTTGAA AAACTTGTGA AATGGAATGG CACCGCCCAC
GTCGACATGA CGCCAGGGGA GTACACCCAA CTCACCGGGC GAGCTGGACG TCGTGGAATT
GATGTGGAGG GGCACGCGGT TGTTGTTGAC CACGTGGGGC TTGACCCGAT GGCGCTTGTC
CGCTTGGCAT CACGGCGCAC CTACCCGCTC CGATCAAGTT TTTCACCGAC CTACAACATG
GCGGTCAACC TTGTTGACCG GTTTGGTTTC GCACAAGCTC GAGAAATCCT CGAAACGTCC
TTTGCACAGT TCCAAGCCGA CCGCGGTGTT GTGGATTTGG CTCGTCAAGC CCAAGGGAAC
TCGGAAGCCC TCACTGGCTA CGAGCAGGCA ATGCACTGTG ATCGTGGTGA TTTTCACGAG
TACATGCTCC TTCGCGAACG GCTGACTCAA CGCGAGCGTC AAGTATCGCA ACAAGCATCA
ACTGCAGCAC GGAACGATGC GATTCGCGCA CTGTCCGCCT TGCGGGTAGG AGACATTGCA
GAAATTCCTT CAGGGCGATC GACCGGCTAT GTTCTGGTAT TGGATCGTGG GAAAGACACA
GGATTTGAAG GACGGCGCCC ATTCGTGTTG ACCGAAGGCG GCAAAACCCG GGTCCTCACC
GCCGCCGATG TTCCCCATGG CCTGACCCAT GTCGGTTCGA TGCGGCTCGA TCCCCGACTC
AATACCCGGC GGCCTTCCGA TCGCAGAGCT GCCACTCAAC AGTTCCGTGA TGTCCTTCGC
CACGGTGACA TGACACCGGC ACCCACACGT GAATATGGGG GCAGAAAGCG CAGGTCTGAC
GCCGGTGGTG ACCGTCTTAT CGCGTCCCTA CGTCAGGAAC TGCGGGACCA CCCCTGCCAT
GCTTGTCCAG ACCGTGATGA CCACGCACGA TGGGGGGAGC GCTGGTTGAC GCTCCGTCGG
GAGCACGAAG GATTGCTGGC ACGCATTGAC CGAAAAACTG GGTCCATCGC CAAAGTCTTT
GACAAAATCT GCCGCGTACT TGATCAGTAT GGGTATGTTG AACGCAACGG TGACCACTAT
GTGGTTACTG AGCAAGGGCG AACACTTCAA CGAATTTACG CCGAAAATGA TCTCCTCATT
GCCGAGTGCC TCACCCATGG GGTGTGGAAA GGACTTGACG CCGCACAGCT TGCTGGCGCA
GTGTCCGCGG CCGTGTATCA AGCGCGAGGC GAGGAACATG CTGAACCCTC GATCCCCGGT
GGGCCGACAG GAAAACTGGG GGGCAGCATC GAAAAAATGG CCGCCATGTG GGGAACACTG
ACCGAACTTG AGGACTCACT CGGATTGGAA GAAACTGGGG ACCTCGACGC AGGACTCGTG
TGGGCCATTC ACGCGTGGAC AAGAGGGCGG TCACTTGACG CAGTCCTTGA TCAATCAGAA
CTCACTGCTG GGGATTTTGT GCGCTGGGCA AAACAGATCC TTGACGCACT TGACCACATC
GCTCATGTTG CGCCGGATGA GGCTGTGGCT CAGACCGCCC GTCAAGCTAT TGACTCTATT
CGACGCGGCG TCGTTGACTA TTCCAGCGTG TAG
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| Protein sequence | MSPKRSRVRE QRKKEAQAVE QPHPEQELSP AQRYAHHQRT RAYPHLSHFA TTLDFPLDEF
QHQACEHLEK GDGVLVAAPT GAGKTIVGEF AVHLALQQHR KAFYTTPIKA LSNQKFHDLQ
RVHGPHNVGL LTGDATINGE APIVVMTTEV LRNMIYAQST TLDNVGYVIM DEVHYLADRF
RGAVWEEVII HLDRSVQLVS LSATVSNAEE FGDWLAAVRG STAVIVSERR PVPLWQHVIT
QGRSDSPGGL IDLYAHTVDP TDPGPTPPIN PDLLNTMRRG RDSGPRQPRR GRPQHSGRRG
PPRFAVINEL AEADLLPAIY FIFSRAGCNA AVEQCLATGI TLTTETQARQ IRIIVESRVA
SVPPEDLSVL GFHGWLDGLT RGIAAHHAGM LPLFKEVVEE LFSRGLIKVV FATETLALGI
NMPARTVVLE KLVKWNGTAH VDMTPGEYTQ LTGRAGRRGI DVEGHAVVVD HVGLDPMALV
RLASRRTYPL RSSFSPTYNM AVNLVDRFGF AQAREILETS FAQFQADRGV VDLARQAQGN
SEALTGYEQA MHCDRGDFHE YMLLRERLTQ RERQVSQQAS TAARNDAIRA LSALRVGDIA
EIPSGRSTGY VLVLDRGKDT GFEGRRPFVL TEGGKTRVLT AADVPHGLTH VGSMRLDPRL
NTRRPSDRRA ATQQFRDVLR HGDMTPAPTR EYGGRKRRSD AGGDRLIASL RQELRDHPCH
ACPDRDDHAR WGERWLTLRR EHEGLLARID RKTGSIAKVF DKICRVLDQY GYVERNGDHY
VVTEQGRTLQ RIYAENDLLI AECLTHGVWK GLDAAQLAGA VSAAVYQARG EEHAEPSIPG
GPTGKLGGSI EKMAAMWGTL TELEDSLGLE ETGDLDAGLV WAIHAWTRGR SLDAVLDQSE
LTAGDFVRWA KQILDALDHI AHVAPDEAVA QTARQAIDSI RRGVVDYSSV
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