| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1247 |
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| Symbol | |
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| ID | 8380424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1333979 |
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| End bp | 1336087 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645003995 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_003161206 |
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| Protein GI | 256832479 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000494823 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.636224 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCGTG GTGTCAGGGG CGGGCACTAT GTTGGGTGTA TGAGTTCTCA CCGTGAATTA
ACCCGTGTTG ATTTCCAGTT TGATGTTGTG TCGGAGTTCT CACCGTCGGG GGATCAGCCC
AGTGCGATTG CTGAGTTGAC GCGGCGTATT CAGGGTGGGG AAAAGGACGT TGTGCTCCTG
GGGGCGACGG GGACGGGGAA GTCGGCAACC AGTGCGTGGC TCATTGAGCA GTTGCAACGT
CCCACGTTGA TTATGGCGCC GAATAAAACG TTGGCTGCGC AGTTAGCGAC GGAGTTTCGA
GAGTTGCTTC CCAACAACGC TGTTGAGTAT TTTGTCTCAT ATTACGACTA TTACCAGCCT
GAGGCGTATA TTGCCCAAAC TGACACCTAC ATTGAGAAGG ACTCCTCAAT TAACGAGGAA
GTGGAGCGTC TTCGTCACTC GGCGACCAAC TCTTTGCTGA CCCGCCGTGA CGTGGTTGTT
GTCGCGTCTG TGTCCTGCAT TTACGGGTTG GGTACCCCGC AAGAATATGT CGATCGGATG
GTTCAGATCG ATGTTGGTGA TGAAATTGAC CGTGATGGTC TGCTGCGCCA CTTCGTGTCG
ATGCAGTACA CGCGCAACGA TGTGGCATTT ACGCGGGGCA CGTTCCGGGT CCGAGGTGAC
ACCGTGGAAA TTATCCCTGT CTATGAGGAA CTAGCGATTC GGCTTGAGTT CTTTGGGGAC
GACATCGAAG CGATCTACAC ACTGCACCCG CTCACCGGTG AAGTTGTGTC CCAAGTGCAA
CGGATCCACA TTTTTCCTGC GTCACACTAC GTGGCTGGTC CCGAACGGAT GGAACGAGCC
ATCGCATCGA TTGAAGCGGA ACTAGAAGAA CGGCTTGCTG AGCTCAACCG GGACAACAAG
TTACTTGAAG CGCAGCGCTT ATCGATGCGC ACCACCTATG ACATCGAAAT GATGCGTCAG
GTGGGGTCGT GTTCTGGGAT TGAAAACTAC TCACGGCACA TTGATGGTCG TGCTCCCGGT
AGCGCACCAC ATACGCTGTT GGATTACTTC CCCGATGACT TTTTGCTGAT CATTGATGAA
TCGCACGTCA CTGTGCCACA AATCGGGGCG ATGTATGAGG GGGACGCTTC GCGAAAACGT
TCTCTCGTGG AGCATGGGTT CCGTCTCCCC TCAGCAATGG ATAACCGGCC ATTGACATGG
GAAGAGTTCA CCGAACGTAT TGGACAAACA GTCTACCTAT CCGCCACACC AGGCGATTAT
GAACTGGCAC TGTCCAACGG CACAGTTGAA CAGATCATTC GTCCAACCGG CTTGGTCGAC
CCGAAGATCA CGGTGAAACC CACCAAAGGC CAAATCGATG ACCTTCTTGA CGAGATCAAC
GAACGGACCG CCAAGAACGA ACGCATACTT GTCACTACCC TCACGAAGAA AATGTCTGAA
GACCTGACCG ACTATCTCCT CGACAAAGGT GTAGCCGTTC GCTATCTTCA CTCAGACATT
GACACTCTCA AACGAGTGGA GCTCCTTCGA GGGCTGCGAC TTGGTGAGTT TGATGTTCTT
GTGGGGATCA ACCTCCTGCG TGAGGGACTT GACCTCCCCG AGGTGTCCCT GGTCGCGATC
CTCGACGCCG ACAAACAAGG GTTCCTACGT TCCCCTCGTT CGCTTATCCA AACCATTGGA
CGTGCCGCAC GTAACGTGTC CGGTGAAGTG CATATGTATG CCGACAGCAT CACCCCGGCC
ATGGCACAAG CCATCGAAGA AACTGAGCGA CGCAGAGAAA AACAGATCGC ATACAACACT
GAACATGGTG TTGACCCACA ACCGCTGCGA AAAAAGATCG CCGACGTCAC CGACATGCTC
GCTCGAGAAG ACATCGATAC ACAAGAACTC CTTGCCGGTG GGTACCGTCA AACAACTACA
CCCACACCAG CGCACACACC ATCAGGTGTG CCCAGCGCAA CAGGTGACCT CAGCGCCCTC
ATTACCCAAC TCACCGAACA AATGCACCAA GCAGCAGCAG AGCTTCAATT TGAACTCGCA
GCGCGCCTAC GCGACGAACT CTCCGACCTC AAACGAGAAC TCCGCCAGAT GAAAGACGCC
ACCTCGTGA
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| Protein sequence | MVRGVRGGHY VGCMSSHREL TRVDFQFDVV SEFSPSGDQP SAIAELTRRI QGGEKDVVLL
GATGTGKSAT SAWLIEQLQR PTLIMAPNKT LAAQLATEFR ELLPNNAVEY FVSYYDYYQP
EAYIAQTDTY IEKDSSINEE VERLRHSATN SLLTRRDVVV VASVSCIYGL GTPQEYVDRM
VQIDVGDEID RDGLLRHFVS MQYTRNDVAF TRGTFRVRGD TVEIIPVYEE LAIRLEFFGD
DIEAIYTLHP LTGEVVSQVQ RIHIFPASHY VAGPERMERA IASIEAELEE RLAELNRDNK
LLEAQRLSMR TTYDIEMMRQ VGSCSGIENY SRHIDGRAPG SAPHTLLDYF PDDFLLIIDE
SHVTVPQIGA MYEGDASRKR SLVEHGFRLP SAMDNRPLTW EEFTERIGQT VYLSATPGDY
ELALSNGTVE QIIRPTGLVD PKITVKPTKG QIDDLLDEIN ERTAKNERIL VTTLTKKMSE
DLTDYLLDKG VAVRYLHSDI DTLKRVELLR GLRLGEFDVL VGINLLREGL DLPEVSLVAI
LDADKQGFLR SPRSLIQTIG RAARNVSGEV HMYADSITPA MAQAIEETER RREKQIAYNT
EHGVDPQPLR KKIADVTDML AREDIDTQEL LAGGYRQTTT PTPAHTPSGV PSATGDLSAL
ITQLTEQMHQ AAAELQFELA ARLRDELSDL KRELRQMKDA TS
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