| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1183 |
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| Symbol | |
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| ID | 8380360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1256387 |
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| End bp | 1257943 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003928 |
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| Product | phosphomethylpyrimidine kinase |
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| Protein accession | YP_003161142 |
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| Protein GI | 256832415 |
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| COG category | [H] Coenzyme transport and metabolism
[K] Transcription |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0819] Putative transcription activator |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00808749 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00513051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGCAT CATGGTCACC TATTCGGGTA CTGACTATTG CAGGGACTGA CCCAACAGGT
GGGGCAGGGG TACAAGCAGA CATCAAAACG ATCACAGCGT GTGGGGGGTA TGCCCTGAGT
GTTGTCACCG CGGTGGTTGC CCAAAACACA GTGGGTGTTC GTTGCTTTGA GTCGGTGTCT
TCCTCTCTGG TTGCCGACCA GTTGGCGGCA GTGGCCAGTG ACACGGCACC GGCTGCGGTG
AAAGTGGGGA TGTTGGGGGA CCCTGCTGTG AGCCGGGAAG TGTGCGAGTT CGCGCGGCAC
CTCACCGTTC CTTTGGTGGT GGATCCTGTC ATGGTGGCCA CCTCAGGGGA TGAGCTTGTG
ACTGGGGTAG CACGCGAAGC GCTATGGGAG CTGTTGCCGT TAGCGACACT GATCACCCCG
AACATTCCTG AGTTAGCGGT GTTGTCAGGG ATGGCGCATG CGGTTAGTGA TGAGGAGTTA
GAACATCAGG CGCGGCTGGT GGCGCACAAG TTCGGGGTCG CTGTGCTTGC GAAAGGGGGG
CATCGTGTGG GTGACACCGC CAGTGATGTG TTGATCGGTG CCCCAGGCCC TGGTGGGCAG
TGTGAGGCAG TGTGGGTGCA TGCGCAACGG GTGAACACGA CGTCCACGCA TGGCACAGGG
TGTTCGTTGT CGTCGGCGAT TGCCACATTG TTAGGGCGTG GATATGACCT GCCGGAGGCG
GTGCGCCGGG CGAAGGTGTG GCTTACCCAG GCGATTCGGG CGGGGGATCG GATGGCAGTG
GGGACCGGTC ATGGTCCTCT TGATCACATG TGGGCTGCCC ATGATGTGTT TGCTCGGGCG
GGGGATCACG GTGATGCCCA GGATGTGGCT TCCCAGTGGT GGGCAGACAT CATGGGGATT
CGTCATGCCA TTGATGAACT GGAATTTGTT CAGCGCCTAG GAAATGGAAC ACTGCCGCCT
GAGGTTTTTG GGTGGTATGT GCACCAAGAT TCCGCGTATT TGCGGGAGTA TTCGCGGGCG
CTTGCGATGG CGTCGACTCT TGCTCCCACC CGTGAGGAGC AGGAGTTGTG GGCGCGCGGG
GCGCATAGCG CCATTCATGT GGAAGCGGGA ATGCATCACA CGTGGCTTGC GCATGCGCAG
ATGGAGCAAC CAGTCGTCAC CTCGCAGGTG ACGCATGGAT ATGTGAACCA TTTTCTGTCG
TATGCGGCAC GCGGCGACTA TGAAGGGCTT ATTGCTGCGT TACTGCCGTG CTATTGGCTG
TACCAGGACA TTGGTATGCG TTTATATCAG CGGTATTGGA CGAGCGAGCA CCCGTACGCG
ACCTGGCTGG CCACCTACCA TGATGAGGAC TTTGCGGCTG CCACGGCCGC TGTGATCGAT
GTGGTGACGA CGGCCGCTGC GCGCGCTGAT GCGGGCACCA CCCAGCGGAT GCGTGATGCG
TTTATTGCTT CTGCGTGGTG GGAGCATGAC TTTTTTGCGG CCCCGTATCG GCGTGCAGTC
CCACGCGGTG ACGATGATGA GGGCACAGGG GCGCTGTCCT CGGTGGTGTC TTTTTAG
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| Protein sequence | MTASWSPIRV LTIAGTDPTG GAGVQADIKT ITACGGYALS VVTAVVAQNT VGVRCFESVS
SSLVADQLAA VASDTAPAAV KVGMLGDPAV SREVCEFARH LTVPLVVDPV MVATSGDELV
TGVAREALWE LLPLATLITP NIPELAVLSG MAHAVSDEEL EHQARLVAHK FGVAVLAKGG
HRVGDTASDV LIGAPGPGGQ CEAVWVHAQR VNTTSTHGTG CSLSSAIATL LGRGYDLPEA
VRRAKVWLTQ AIRAGDRMAV GTGHGPLDHM WAAHDVFARA GDHGDAQDVA SQWWADIMGI
RHAIDELEFV QRLGNGTLPP EVFGWYVHQD SAYLREYSRA LAMASTLAPT REEQELWARG
AHSAIHVEAG MHHTWLAHAQ MEQPVVTSQV THGYVNHFLS YAARGDYEGL IAALLPCYWL
YQDIGMRLYQ RYWTSEHPYA TWLATYHDED FAAATAAVID VVTTAAARAD AGTTQRMRDA
FIASAWWEHD FFAAPYRRAV PRGDDDEGTG ALSSVVSF
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