| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1179 |
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| Symbol | |
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| ID | 8380356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1252492 |
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| End bp | 1253703 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003924 |
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| Product | band 7 protein |
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| Protein accession | YP_003161138 |
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| Protein GI | 256832411 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.473377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000901683 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGAACTGG CAATTATTGG TCTCATCGCG CTCGCGATCC TCGTTATCAC GGTGCTGTTC
AAGGCCGTGC GGATCGTCCC TCAAACCGTT GCACTCATTG TGGAACGCCT GGGACGCTAC
CACCGGACGA TGGACGCGGG TCTTCACTTC TTGGTCCCCT TTGTGGACCG TGTCCGCGCT
GGCGTGGACT TGCGTGAACA GGTTGTGTCC TTTCCGCCAC AGCCGGTTAT TACCTCTGAC
AACCTTGTTG TCTCCATCGA CTCGGTGATC TACTTCCAGG TCACTGACCC CAAGTCCGCC
GTCTACGAGA TCGCGAACTA CATCACTGCG ATTGAACAGC TCACGGTGAC CACCCTTCGT
AACGTCATTG GTTCCATGGA CCTGGAACAA ACTCTGACTT CCCGTGACCA GATCAACGGA
CAACTTCGTG GCGTCCTTGA CGAGGCAACC GGACGCTGGG GTATTCGCGT GAACCGCGTG
GAACTCAAAG CAATTGACCC ACCGGCATCT GTTCAAGGTT CCATGGAACA ACAGATGCGC
GCTGAGCGTG ACCGCCGCGC GGCGATCCTC ACCGCTGAAG GTGTGAAACA GTCACAAATC
CTCACCGCTG AAGGTGAAAA ACAGGCTGCG ATTTTGCGTG CTGAAGGTGA AGCACAGTCC
GCGATTTTGC GTGCTGAAGG TGAAGCACGT GCCATCCTTC AGGTGTTTGA CGCGATCCAC
GAAGGTGACG CTGACCCCAA GCTTCTGGCC TACCAATACC TGCAGAAACT GCCAGAAATC
GCCAACGGTT CCTCGTCGAA GATGTGGATT GTGCCAGCCG AGTTCACCAC AGCTCTCAAC
GGGATCGCCT CCGGGTTTGG TGGAACCGCC CCAGAACCGG TGGACCCGCA AGCATTTGCC
GGCACGAAAG ATGCTGAAGG GCGCCGAGCA CGCCGCGAAC GCCTCGAAAA GGGGTTCGGG
CTTACCGACC CAACTGAAGC GTTGGAAGAA GCTCGCCGTC AAGCAGAAGC TGCCCGCGCA
GATGCCACCA CGGCAGGCAC CCGCTCTGGG CGTCCCGCTA ACCCGCGCAG CACGGTGGGG
CAAAACCCTG ACGAGGCACC GAACAATGGC ACCGGTCAAA ACTTTGCGCC ACCAGCACCA
CGGCCAGTCA CACCCCCGCA AAGTCCAGAT CAAGGCCAGC AACCACCGGC GCCTCCCGCA
CCTCAGCAGT AA
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| Protein sequence | MELAIIGLIA LAILVITVLF KAVRIVPQTV ALIVERLGRY HRTMDAGLHF LVPFVDRVRA
GVDLREQVVS FPPQPVITSD NLVVSIDSVI YFQVTDPKSA VYEIANYITA IEQLTVTTLR
NVIGSMDLEQ TLTSRDQING QLRGVLDEAT GRWGIRVNRV ELKAIDPPAS VQGSMEQQMR
AERDRRAAIL TAEGVKQSQI LTAEGEKQAA ILRAEGEAQS AILRAEGEAR AILQVFDAIH
EGDADPKLLA YQYLQKLPEI ANGSSSKMWI VPAEFTTALN GIASGFGGTA PEPVDPQAFA
GTKDAEGRRA RRERLEKGFG LTDPTEALEE ARRQAEAARA DATTAGTRSG RPANPRSTVG
QNPDEAPNNG TGQNFAPPAP RPVTPPQSPD QGQQPPAPPA PQQ
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