Gene Jden_1168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1168 
Symbol 
ID8380345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1243445 
End bp1244086 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content58% 
IMG OID645003913 
Productphosphoserine phosphatase SerB 
Protein accessionYP_003161127 
Protein GI256832400 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.748705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCCGCCTTGT CGTCATGGAT GTCGACTCCA CACTCATTGA ACAAGAAGTC 
ATCGAGCTGA TCGCTCAGCA CGCAGGGACC TATGAGCTGG TAGCCAACAT CACAGAACGC
GCGATGCGCG GCGAACTGGA TTTTGCGGCA TCACTGGCTG CACGGGTAGA CACGCTTGCT
GGGGTGCACG TGGACGATCT TGCCAAGGTG CGTGATGCGG TCACGTTTAG TCCAGGTGCC
CGCGAGTTCA TCGCTGAATG CCAGCGCCGT GGGTGGGAAG TCGCACTTGT GTCAGGAGGG
TTCACGGAAA TCGTGCGCCA CCTTGCCCAC GAGGTAGGCA TTACCAGGTT CCGGGCTAAC
CATCTGGACG TGGTGGCAAA TCGGTTGACG GGACGCACCA CTGGCACCAT TGTGGACCGC
GCCTACAAAG AAACATCTCT GCGCGAGTTT GCGGCCGAGC TGGGTATCCC CATGGATGAC
ACGGTAGCTA TTGGTGATGG GGCCAACGAC CTTGACATGA TCCATGCCGC TGGAATTGGC
ATCGCCTACA ACGCGAAACC TATTGTTGTT GAACAAGCGC CCTACGCGAT CTCGGGTTCC
CTGATCTCGG CACTTGATGT GATCGACAAC CACCCCAAGT AG
 
Protein sequence
MTTTRLVVMD VDSTLIEQEV IELIAQHAGT YELVANITER AMRGELDFAA SLAARVDTLA 
GVHVDDLAKV RDAVTFSPGA REFIAECQRR GWEVALVSGG FTEIVRHLAH EVGITRFRAN
HLDVVANRLT GRTTGTIVDR AYKETSLREF AAELGIPMDD TVAIGDGAND LDMIHAAGIG
IAYNAKPIVV EQAPYAISGS LISALDVIDN HPK