Gene Jden_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1145 
Symbol 
ID8380322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1226296 
End bp1226832 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content57% 
IMG OID645003890 
ProductSUF system FeS assembly protein, NifU family 
Protein accessionYP_003161104 
Protein GI256832377 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID[TIGR01994] SUF system FeS assembly protein, NifU family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGC TCTACCAGCA GGTCATCCTT GACCATTACA AAAACCCGCA CGGTAAAGGT 
CTCGCTGATG CCGACCCAAC CGCGCTCAGC GGGTTGTCCC ACCAAGTGAA CCCTACCTGT
GGTGATGAAG TCACGATGCG TGTCCACTTC AGTGGCGACG GGGGTGAACG AACCGTCCAG
TCTGTGACCT GGGACGGGCA AGGGTGCTCT ATCTCTCAAG CGTCGATCTC TGTCCTTGTG
CAACTTGTCC AGGGGCAGCG GGTCGCCGAC GTCGAACATG TTGCTGAGGT GTTTCGTGAA
CTCATGGACA CGCGAGGTAA GGGGTTCCCG GTGGACGACG CCTCAGCTGA AGACAAAGAA
GACCTCCTCG GTGACGCTAA TGCGTTCACC GGGGTATCCA AATTCCCTGC TCGTATTAAG
TGTGCGTTGT TGGGGTGGTC GGCACTCAAA GACACCCTCG CATCGACCGG AGCGAGCGCA
GAAGCACACG AACAGGGCAT CAACCACTGT TCACAACCAT CCAAGGAGAC GCCATGA
 
Protein sequence
MEQLYQQVIL DHYKNPHGKG LADADPTALS GLSHQVNPTC GDEVTMRVHF SGDGGERTVQ 
SVTWDGQGCS ISQASISVLV QLVQGQRVAD VEHVAEVFRE LMDTRGKGFP VDDASAEDKE
DLLGDANAFT GVSKFPARIK CALLGWSALK DTLASTGASA EAHEQGINHC SQPSKETP