Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1145 |
Symbol | |
ID | 8380322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1226296 |
End bp | 1226832 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003890 |
Product | SUF system FeS assembly protein, NifU family |
Protein accession | YP_003161104 |
Protein GI | 256832377 |
COG category | [C] Energy production and conversion |
COG ID | [COG0822] NifU homolog involved in Fe-S cluster formation |
TIGRFAM ID | [TIGR01994] SUF system FeS assembly protein, NifU family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGC TCTACCAGCA GGTCATCCTT GACCATTACA AAAACCCGCA CGGTAAAGGT CTCGCTGATG CCGACCCAAC CGCGCTCAGC GGGTTGTCCC ACCAAGTGAA CCCTACCTGT GGTGATGAAG TCACGATGCG TGTCCACTTC AGTGGCGACG GGGGTGAACG AACCGTCCAG TCTGTGACCT GGGACGGGCA AGGGTGCTCT ATCTCTCAAG CGTCGATCTC TGTCCTTGTG CAACTTGTCC AGGGGCAGCG GGTCGCCGAC GTCGAACATG TTGCTGAGGT GTTTCGTGAA CTCATGGACA CGCGAGGTAA GGGGTTCCCG GTGGACGACG CCTCAGCTGA AGACAAAGAA GACCTCCTCG GTGACGCTAA TGCGTTCACC GGGGTATCCA AATTCCCTGC TCGTATTAAG TGTGCGTTGT TGGGGTGGTC GGCACTCAAA GACACCCTCG CATCGACCGG AGCGAGCGCA GAAGCACACG AACAGGGCAT CAACCACTGT TCACAACCAT CCAAGGAGAC GCCATGA
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Protein sequence | MEQLYQQVIL DHYKNPHGKG LADADPTALS GLSHQVNPTC GDEVTMRVHF SGDGGERTVQ SVTWDGQGCS ISQASISVLV QLVQGQRVAD VEHVAEVFRE LMDTRGKGFP VDDASAEDKE DLLGDANAFT GVSKFPARIK CALLGWSALK DTLASTGASA EAHEQGINHC SQPSKETP
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