Gene Jden_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1117 
Symbol 
ID8380294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1188060 
End bp1189301 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content55% 
IMG OID645003858 
Productargininosuccinate synthase 
Protein accessionYP_003161076 
Protein GI256832349 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0137] Argininosuccinate synthase 
TIGRFAM ID[TIGR00032] argininosuccinate synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.558205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAC GTATTGTCCT TGCATACTCC GGTGGTTTGG ACACCTCGGT AGCAATCGGG 
TGGATCGCTG AAGCGACAGG TGCTGAGGTG ATTGCTGTTG CTGTCGATGT AGGCCAAGGG
GGAGAAGACC TCGAAGTAAT CCGCCAGCGT GCCCTGGACT GTGGTGCGGT GGAAGCATAC
ATTGCTGATG CGCGTGATGA GTTCGCAGGT GAATACTGCA TGCCTGCTTT GCAGGCTAAC
GCCCTGTACC TTGACCGTTA CCCGTTGGTG TCGGCACTGT CACGCCCAAC TATTGTCAAA
CACTTGGTGC GGGCTGCTCG CCAGTTTGAT GCGACAACCG TGGCTCACGG GTGCACAGGC
AAGGGCAACG ATCAGGTTCG TTTCGAGGTG GGTATTACTT CTCTTGCACC AGACTTGAAA
TGCCTCGCAC CAGTGCGTGA TCTTGCGCTG ACAAGGGATA AAGCAATTGC TTACGCGGAG
AAGAACTCGC TGCCCATCGC TACAACGAAG CACAACCCGT TCTCCATTGA CCAGAACGTG
TGGGGCCGCG CGGTGGAAAC AGGATTCTTG GAAGACATTT GGAACGCCCC TACCAAAGAC
GTCTACAACT ACACTGATGA CCCGACCTTC CCGCCAGTAG CTGACGAAGT AGTCATCACC
TTTGACCGGG GTGTTCCCGT GGCACTGGAC GGTGTTGCTG TGACTCCACT GCAAGCCATC
CAAGAAATGA ACCGCCGAGC CGGTGCACAA GGTGTGGGAC GAATCGACAT TGTTGAAGAC
CGGCTCGTGG GAATTAAGTC TCGCGAAATC TATGAAGCAC CCGGTGCAAT GGCTCTCATC
GCAGCACACC AAGAACTCGA GAATGTCACC CTTGAGCGGG AACAAGCACG GTTCAAGCGC
ACAGTGGAAC AGCGGTGGAC TGAATTGGTC TATGACGGCA TGTGGTTCTC TCCCCTCAAG
CGGTCCTTGG ACACGTTCAT CGCGGACACC CAACGGTACG TGTCAGGTGA CATTCGCATG
ACACTGCACG GAGGTCGCGC CACCGTCACA GGCCGACGCT CAGACGCATC TCTGTATGAT
TTCAACCTTG CGACCTACGA TGAAGGAGAT GCGTTTGATC AGTCACAAGC ACGTGGCTTC
ATCGAAATCT TTGGTCTCAC CGCAAAACTT GCCGCTGCAC GTGACGTGAA GTTCGGCAAC
GGTGTTGACT TATCCGGCCA GTCAGTTGCT ACGCAGGAAT AA
 
Protein sequence
MTERIVLAYS GGLDTSVAIG WIAEATGAEV IAVAVDVGQG GEDLEVIRQR ALDCGAVEAY 
IADARDEFAG EYCMPALQAN ALYLDRYPLV SALSRPTIVK HLVRAARQFD ATTVAHGCTG
KGNDQVRFEV GITSLAPDLK CLAPVRDLAL TRDKAIAYAE KNSLPIATTK HNPFSIDQNV
WGRAVETGFL EDIWNAPTKD VYNYTDDPTF PPVADEVVIT FDRGVPVALD GVAVTPLQAI
QEMNRRAGAQ GVGRIDIVED RLVGIKSREI YEAPGAMALI AAHQELENVT LEREQARFKR
TVEQRWTELV YDGMWFSPLK RSLDTFIADT QRYVSGDIRM TLHGGRATVT GRRSDASLYD
FNLATYDEGD AFDQSQARGF IEIFGLTAKL AAARDVKFGN GVDLSGQSVA TQE