Gene Jden_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1079 
Symbol 
ID8380256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1152132 
End bp1152614 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content56% 
IMG OID645003820 
Productprotein of unknown function DUF552 
Protein accessionYP_003161038 
Protein GI256832311 
COG category[S] Function unknown 
COG ID[COG1799] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.208009 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAG CGCTACGCAA GACGATGGAG TACCTAGGCA TCGCGGAACA AAACCACGAC 
CTCGAAGCCG AGTACGATGA GTACGAAGAC GAGTATGACG AGGTTGAGGA ATCCGTGATG
GACACCTTTG ACGCACAGGT CACTCCGATT CGCCGGGCAG TGACTGAACG TGAGGAGGAC
GCGGTCATGC ACCACTCCTT GCCGCGCATT ACGACCGTGC ATCCACGGTC CTACAACGAT
GCTCGTGTGA TTGGGGAGGC CTTCCGGTCT GGTACGCCGG TGATCATTAA CCTTTCTGAT
ATGGATGAAT CAGACGCGAA GCGGCTCGTG GACTTCTCAT CGGGGTTAAT CTTCGGTCTG
AACGGATCAA TCGAGCGGGT CACCGCGAAG GTTTTCCTTC TTTCCCCACA GAACGTTGAA
ATTGCCGCCA ATGGTTCGGA CGCCCGTGAT GGGTCCCGAC AGAGTTTCTA CAATCAGAGC
TGA
 
Protein sequence
MAGALRKTME YLGIAEQNHD LEAEYDEYED EYDEVEESVM DTFDAQVTPI RRAVTEREED 
AVMHHSLPRI TTVHPRSYND ARVIGEAFRS GTPVIINLSD MDESDAKRLV DFSSGLIFGL
NGSIERVTAK VFLLSPQNVE IAANGSDARD GSRQSFYNQS