| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1059 |
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| Symbol | |
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| ID | 8380236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1127716 |
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| End bp | 1129914 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003800 |
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| Product | Superfamily I DNA and RNA helicase-like protein |
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| Protein accession | YP_003161018 |
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| Protein GI | 256832291 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.394879 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCGAAC ACCGCGACAC CCTCGCACAG GAACAGCGTA TCGTCGATGC GCTTTACGCA
CGGTTGGATG AGTTGCGTGA CGCGACTGCT GCTCGGCTCG CTGCCGTTCG TAAACAGGGA
CCAACTGGCT CGCCGCAAAA CCGTTCTGAA CGGGATTCAT TTGCAACCCA TTATGAGGAT
CGGCTCGCGT TGCTCCACGC GGTGGAAGAG CGTCTTGTCT TTGGTCACTT GTCACTGACT
GATGATTCAA CCCGCCATAT TGGGCGGGTG GGGTTAACTG ATGCGCAGCA TCAGTCTATT
TTGACGGACT GGCGCGCTCC GGCTGCGGAA CCGTTTTACC GTGCGACATT AGCGCATCCA
CAGGGGGTAA TCCGGCGCAG GCACTTAACC ACCTCGGGGC GTCAGGTCAC TGCTGTCGAA
GATGAGTTAC TCACGTTGAG TGACTCAGAT GAGGAACTTC CACCCCTGCA GGGGGAGGGG
GCACTGCTTT CTGCAATGGC CCGGGGCCGG ACCGGAAAGA TGGGCGACAT TGTCGCAACA
ATTCAGCGCG AACAAGACGA GATAATCCGC GCTCCTCTCC ACGGGGCCCA CGTTGTTCAA
GGCGGGCCAG GAACCGGAAA AACTGCTGTT GCTTTACACC GTGCAGCATA TTTGTTGTAC
GCACACCGCC GAGTATTGGA ACGCTCCGGG GTTCTTTTGA TTGGGCCTTC GTCAGCGTTT
CTTCGCTATA TCGACCAAGT TCTTCCCTCA CTTGGCGAGA CAGGTGTAGT GTCCACAACA
CTAGCCTCAT TGATGCCCGG TGTTGTTGCG GAAGCAGAAG ACTCCCCTGA GGCCGCAGCC
TTAAAGGGTG ACGTGCGCTT TGCGCGCTAT GTGCGTGCCG CTGTCAAAGC CCGCCAACAG
GTGCCGTCGC AAAACACAAC ACTGCGCATC GACGGTCATC TGCTTGTGGT CACCCCCCGT
GACGTTAAAG AATCGATGAC CCGTGCACGA CGGGCCAACA AACCGCACAA CGAAGGATGG
GACATCTTCG CTCGTGACAT GCTCAATAAG TTGGCCGCGC AGTACGCCCA AGACATGCCA
TACCACGTTG CAGCAGAAGA CCGCGCAGAC ATCATTGCTG AGTTGCGCTC ACATCGCGAG
GTACGCCGCC TGATCAACCT TGCGTGGTTC CCCATCAGCG CCCCGCAACT CGTTGATGCG
CTCCTGTCGC GCCCACATCG CCTCCTCCAG GCAGCTCCAG ACCTAACCGA CGCTGAACGA
TCAGCTCTTC TTCGACCTCC TGGCTCCGCA TGGACAACCT CGGACATCCC ATTACTGGAT
GAAGCTGAGG AACTCCTCGG CCCGTTGCCA GGGCGCAACC ACCAAGCGCC CTCCCCCAGT
GTCGACCACG AATACGCCCA AGCGGTGATC AACGAAACTG GTGTTGCGGG TTTAGTAAGC
GCCCACGATT TGGAAGCACG ATTTCGAGCC CACGGTCCGG TCATGTCCTT GGCTGAACGA
GCTGGCAGTG ACCGGCAATG GACATATGGT CACGTCATCG TGGACGAAGC ACAAGAATTG
TCTCCGATGG ACTGGCGAAT GCTGATACGC CGCTGCCCAA CACGGTCCTT CACCATCGTG
GGTGATACAG CCCAAACTTC GCGAGCTGGT GGTGCACGGA CCTGGGAGGG TATGTTCACA
CCCGTGTTTC GCGAGCACTG GACCCAGCAT ACGTTGACTA TTAACTACCG TACTCCAGCT
GCGATCGCTG ACACGGCAAT GCGTTATGCG CATCATGCAG GACTGACCAC GTCTCCTCTC
ACCTCGGCTC GTGATGTCGC AGGAGCACTC GATGTGATTC GGGTTCCTGA TGATGGCTGG
GACAACACTC TTGTGACCGC TGTCAACGAG GCGATCAGCC GGTTTATCTC GGCCGACCGA
GGGCAAGTCG CCGTCATCAC AAGTTCACGA CAGTTGTCTC GCATCACGTC ACTGGTCGAC
ACGTGCGTTG CTCGTCACGG TGATGTTCGG CGTGGATCCG TGGACACCCT GACACCACGC
GCGGTGAAAG GTCTAGAATT CGATGCAGTC ATTCTTGTTG ACCCTCAGGA GATCGAGGAT
GAAGTTGGGG CTTCGGATCT GTTCGTTGCT TTAACGAGAC CAACCCAGCA CCTTTGTGTC
CTGACACCAT CTCGTGCACC GTGGTTCTCC GCCCAGTGA
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| Protein sequence | MAEHRDTLAQ EQRIVDALYA RLDELRDATA ARLAAVRKQG PTGSPQNRSE RDSFATHYED
RLALLHAVEE RLVFGHLSLT DDSTRHIGRV GLTDAQHQSI LTDWRAPAAE PFYRATLAHP
QGVIRRRHLT TSGRQVTAVE DELLTLSDSD EELPPLQGEG ALLSAMARGR TGKMGDIVAT
IQREQDEIIR APLHGAHVVQ GGPGTGKTAV ALHRAAYLLY AHRRVLERSG VLLIGPSSAF
LRYIDQVLPS LGETGVVSTT LASLMPGVVA EAEDSPEAAA LKGDVRFARY VRAAVKARQQ
VPSQNTTLRI DGHLLVVTPR DVKESMTRAR RANKPHNEGW DIFARDMLNK LAAQYAQDMP
YHVAAEDRAD IIAELRSHRE VRRLINLAWF PISAPQLVDA LLSRPHRLLQ AAPDLTDAER
SALLRPPGSA WTTSDIPLLD EAEELLGPLP GRNHQAPSPS VDHEYAQAVI NETGVAGLVS
AHDLEARFRA HGPVMSLAER AGSDRQWTYG HVIVDEAQEL SPMDWRMLIR RCPTRSFTIV
GDTAQTSRAG GARTWEGMFT PVFREHWTQH TLTINYRTPA AIADTAMRYA HHAGLTTSPL
TSARDVAGAL DVIRVPDDGW DNTLVTAVNE AISRFISADR GQVAVITSSR QLSRITSLVD
TCVARHGDVR RGSVDTLTPR AVKGLEFDAV ILVDPQEIED EVGASDLFVA LTRPTQHLCV
LTPSRAPWFS AQ
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