Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1044 |
Symbol | |
ID | 8380221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1112527 |
End bp | 1114131 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003785 |
Product | RNA modification enzyme, MiaB family |
Protein accession | YP_003161003 |
Protein GI | 256832276 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.852588 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCC CACATGTTCC GCAACGTGCG TTGGACACCC AACCTCGGAC CTACACCGTG AAGACCCTTG GGTGCCAGAT GAACGTCCAC GATTCTGAAC ACATGGCGGG GTTGCTTGAG CAAGCAGGGT ATGTGAAAGC CCCCGATGGA TCAGATGCCA CTGGCGACGC GGACATTGTG GTCATCAACA CCTGTGCAGT GCGGGAAAAC GCAGCCAATA AGCTGTATGG CCAGCTAGGG CAGCTCGCAG CGATCAAACG CACCAAACCA GGAATGCAAA TTGCTGTTGG TGGTTGCTTG GCCCAAAAAG ATCGCGGAGT GATCGTTGAA CGCGCCCCGT GGGTGGACGT TGTTTTTGGC ACCCACAACC TCGATGTGTT GCCGGTGTTG TTGGAACGCG CACGCCACAA CGAGGAGGCT CAGGTTGAGA TCGCCGAGTC GCTCCAGGTG TTCCCGTCGA CCTTGCCAAC GCGGCGAGAG TCGGTTTATG CGGGTTGGGT CAGTATTTCT GTGGGGTGTA ACAACACGTG CACTTTTTGT ATCGTTCCGC ATCTGCGCGG TAAGGAACGT GACCGTCGCC CCGGTCAGAT CCTTGCCGAG GTTGAGGCCC TTGTCGCTGC CGGTGCTGTG GAAGTGACTT TATTGGGACA GAACGTCAAT AGCTATGGCG TCGAGTTCGG GGATCGAGGA GCTTTTGCCA AGCTCCTTCG TGCCTGTGGT GATATTGAAG GGTTGGAGCG TGTTCGGTTC ACCTCGCCGC ACCCCGCAGC GTTCACTGAC GATGTCATCG AAGCGATGGC TCAAACTCCT AACGTGATGC CATCCTTACA CATGCCATTG CAGTCGGGAT CGGATCGAAT CTTGCGCGCG ATGAGACGTT CTTATCGATC AGAGAAGTTT TTAGGAATCC TTGATCGAGT GCGCACCGCA ATGCCGGATG CGGCGATCAC CACGGATATT ATTGTCGGTT TTCCTGGGGA GACGGAAGAA GATTTCCAGG CGACCCTTGA TGTTGTCCGG CAGTCACGAT TCGCGTCAGC CTTCACGTTC CAGTATTCGC CTCGACCGGG AACGCCGGCT GCGACGTTAG ATGGGCAACT GCCTAAAGAG GTGGTTCAAG AACGCTATGA GAGACTTCTT GCTGCTCAAG ACGAGATCAG TGCTGCAGAG TCACAAGCAC TTGTCGGCCG AACGGTTGAG GTGCTTGTCG CCGAGTCCGA TGGGCGCAAG GATGACGCGA ACCATCGTTT AACCGGGCGA GCCCAAGACA ATAGACTGGT CCACTTCGCG TTGCCGAAGG GCGTGGATTG GGATGGTGCA CAGGTTCATC CTGGTGATAT ACGCCTAGCA GATGAGGTCC CAACGCTTGT TCCCCGCCCG GGGGACATGG TGAAGGTGGA TGTCACGCGG GGAGCCCCGT TTTATGTTGT TGCCGACTCA GCGGTCAATG GGGGGCGGTT TGAGGTACGG CGCACCCGGG CGGGGGATGC GTGGGCTCGC CGTGAAAAAA CTCGGTTGGG GCTTCTCGCT GAAGAACACT CCCATGGAGG GCCGCCGACT ACTGCTGGTG GAGTACTTCT GGGTATGCCA CAACGACGTC AGTGA
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Protein sequence | MTSPHVPQRA LDTQPRTYTV KTLGCQMNVH DSEHMAGLLE QAGYVKAPDG SDATGDADIV VINTCAVREN AANKLYGQLG QLAAIKRTKP GMQIAVGGCL AQKDRGVIVE RAPWVDVVFG THNLDVLPVL LERARHNEEA QVEIAESLQV FPSTLPTRRE SVYAGWVSIS VGCNNTCTFC IVPHLRGKER DRRPGQILAE VEALVAAGAV EVTLLGQNVN SYGVEFGDRG AFAKLLRACG DIEGLERVRF TSPHPAAFTD DVIEAMAQTP NVMPSLHMPL QSGSDRILRA MRRSYRSEKF LGILDRVRTA MPDAAITTDI IVGFPGETEE DFQATLDVVR QSRFASAFTF QYSPRPGTPA ATLDGQLPKE VVQERYERLL AAQDEISAAE SQALVGRTVE VLVAESDGRK DDANHRLTGR AQDNRLVHFA LPKGVDWDGA QVHPGDIRLA DEVPTLVPRP GDMVKVDVTR GAPFYVVADS AVNGGRFEVR RTRAGDAWAR REKTRLGLLA EEHSHGGPPT TAGGVLLGMP QRRQ
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