Gene Jden_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1004 
Symbol 
ID8380181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1064373 
End bp1065224 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content57% 
IMG OID645003745 
Productribosomal protein S2 
Protein accessionYP_003160963 
Protein GI256832236 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.663705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTG TCACCATGCG TCAACTTCTT GACGCTGGTG TCCACTTCGG ACACCAAACC 
CGTCGCTGGA ACCCCAAGAT GAAGCGATTC ATCTTCACCG AGCGCAACGG CATCTACATT
GTCGACCTCC AGCAGTCACT GAGCTACATT GACCGTGCTT ACGAGTTTGT CAAAGAAACC
GTGGCTCGCG GTGGGTCAGT GCTGTTCGTT GGGACCAAGA AGCAAGCACA AGAACCTGTT
GCAGAACAAG CATCACGCGT GGGCATGCCC TACGTTAACC ACCGTTGGCT TGGTGGGATG
CTCACCAACT TCCAGACCGT CAACAAGCGT TTGCAGCGTC TGAAGGAACT TGAGCAGATC
GACTTCGACG ATGTCGCAGG TTCCGTCTAC ACCAAGAAGG AACTTCTCAT CATGCGCCGT
GAGAAGGACA AGCTGGCTCG CACCCTTGGT GGGTTGCGCG ACATGTCTCG TCTTCCTTCT
GCTTTGTGGG TTGTTGACAC CAACAAGGAA CACCTCGCTG TTGACGAGGC GCGCAAGCTG
GGGATCCCGG TTGTTGCGAT CCTCGACACC AACTGCGACC CCGACCACGT TGATTACAAG
ATTCCTGGCA ACGACGATGC AATCCGCGCC GTTGCACTGC TGACCCGCGT GGTTGCTGAT
GCAGTTGCTG AAGGTCTTGT GGCACGTAGC AAGGGCGGCA AAGCAGACGC TGAGCCTCTC
GCTGAATGGG AACGTGAGCT CCTTGAAGGT GGGCAAGAAA AGGCACCAGA AGCCGACGCT
GCACCAGCTG CCGATGCTCC CGCTGTGGAC GCTGCTGAGA ACACAGAAGC TCCAGCCGCT
CCAGCCGAGT AA
 
Protein sequence
MAVVTMRQLL DAGVHFGHQT RRWNPKMKRF IFTERNGIYI VDLQQSLSYI DRAYEFVKET 
VARGGSVLFV GTKKQAQEPV AEQASRVGMP YVNHRWLGGM LTNFQTVNKR LQRLKELEQI
DFDDVAGSVY TKKELLIMRR EKDKLARTLG GLRDMSRLPS ALWVVDTNKE HLAVDEARKL
GIPVVAILDT NCDPDHVDYK IPGNDDAIRA VALLTRVVAD AVAEGLVARS KGGKADAEPL
AEWERELLEG GQEKAPEADA APAADAPAVD AAENTEAPAA PAE