| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0966 |
|---|
| Symbol | |
|---|
| ID | 8380143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1022310 |
|---|
| End bp | 1023419 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645003707 |
|---|
| Product | transport system permease protein |
|---|
| Protein accession | YP_003160925 |
|---|
| Protein GI | 256832198 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGG TAGCCACCGA CATTCCCCGT CCACATCAGG TGGCTGGTGA GCAATCCGCG
CCAACTGGTG CGCGTGGTGG ACGCCCCCGG TGGGCGGCCC TCGCGTGGGG GGTCGCCGGA
CTTGTTGTTG TGCTCGCCAG CATCATCGGC GGTGTATTGG TTGGCCCGGC ACAGATCAGT
GTGGCGCAGG TGCTCCAGGT GTTCGCCACT GAAAGTGGTG TGGGCGAGGG GTTCCCTGGG
GTGGCGGTGT CCCGATTGGA ACACGCAATG GTGTGGGATT TGCGCCTCCC TCGGGTCCTT
ACCGCAGGTT TCGTGGGAGC CGGGTTGGCA ATCAGTGGCG TCATCATGCA GTCACTGACC
CGCAACCCTC TCGCGGACCC CTATTTGGTG GGGTTGTCGT CAGGGGCATC GTTAGGGGCG
GTCAGTGTGC TGGTGTTGTC GGCGAGTGTC GCATTGCCTG TCGCTGCGTT CCTCGGCTCA
CTGGGGGCAC TCATCGCGAC GTTGGGGCTG GCCCGCGCAC TCGGTACCGT CACCCCTACC
CGGGTGATTC TGGCCGGGCT CGCGGTGTCG CAATTGTGCT CTGCACTGGT TTCTTTTGTT
GTGTTCACCG CTGCTTCCGG AGACACCTAC CGTGAGGTTC TTGCCTGGCT TTTGGGCTCA
TTAGCATCAG CGAGTTGGGA CTCAGCCGCC ATTGGCGTAG CTGTATATGT CGTAGTGGGG
CTACCGCTCC TTGCCACAGG AAACGTCCTT GATGCGTTCA CCTTTGGCGA GTCCCATGCC
CATGCGCTGG GTGTGCGTGT TGAGCAATGG CGATGGGCGC TTCTCATCGC TGTTGCTTTG
CTCGTCGGGG TTTTGGTCTC TATTTCTGGG GCGATTGGGT TTATCGGCAT CATTGTGCCG
CATACGGTTC GTCTGTTTAC CGGCCCCCGC CACCGCCTTC TGTTACCGTT CTCTGCCATG
TGTGGTGCAG TTTTTTTGAT GTGGAGTGAC ACCCTTGCAC GCATAATCAT GGAGCCAAAA
GAAATCCCCG TCGGTGTCAT CACGGCACTT GTCGGAGCTC CCATTTTCGC GTGGGCGCTG
TACCGCCACC GGTCAGGAAC ACCGCAATGA
|
|---|
| Protein sequence | MAQVATDIPR PHQVAGEQSA PTGARGGRPR WAALAWGVAG LVVVLASIIG GVLVGPAQIS
VAQVLQVFAT ESGVGEGFPG VAVSRLEHAM VWDLRLPRVL TAGFVGAGLA ISGVIMQSLT
RNPLADPYLV GLSSGASLGA VSVLVLSASV ALPVAAFLGS LGALIATLGL ARALGTVTPT
RVILAGLAVS QLCSALVSFV VFTAASGDTY REVLAWLLGS LASASWDSAA IGVAVYVVVG
LPLLATGNVL DAFTFGESHA HALGVRVEQW RWALLIAVAL LVGVLVSISG AIGFIGIIVP
HTVRLFTGPR HRLLLPFSAM CGAVFLMWSD TLARIIMEPK EIPVGVITAL VGAPIFAWAL
YRHRSGTPQ
|
|---|
| |