| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0829 |
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| Symbol | |
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| ID | 8380012 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 891294 |
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| End bp | 892589 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645003570 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_003160794 |
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| Protein GI | 256832067 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.829074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.764393 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACCC ACCTCTTCGA CACTGTTGAT GTCATCCGGG CCAAGCGTGA TGGACGTGAA
CTGACCAGCG AAGAAATCGC CTGGGTCATC GATGCCTACA CCCACGACCA CGTGGCCGAT
TACCAAATGG CTGCCCTGAA CATGGCCATC TTGCTCAACG GCATGACCCG CCGGGAAATC
GCTGACTGGA CCCGGGCGAT GATCGAATCA GGCGAACGCA TGAACTTTGA TCAGTTGTCC
CGCCCCACCG CGGACAAACA CTCCACCGGC GGAGTGGGAG ACAAAATTAC TCTCCCATTG
GCACCCCTCG TTGCCGTGTT TGACGTGGCC GTCCCCCAAC TGTCTGGGCG TGGACTGGGG
CACACTGGTG GCACGCTCGA CAAACTCGAA GCGATCGCCG GGTGGCGCGC TGCACTCACC
AACGACGAAA TGATGCACCA ACTGGACACG GTGGGGGCGG TGATCTGCCA AGCGGGTTCA
GGTCTTGCAC CAGCGGACCG GAAGCTGTAC GCACTGCGCG ATGTCACGGG AACCGTTGAA
GCGATCCCAC TGATTGCATC GTCAATCATG AGCAAAAAAA TCGCAGAAGG AACGTCTGCG
CTGGTTCTTG ACGTCAAAGT CGGCTCCGGG GCATTTATGA AAAATGTGGA CCAAGCACGG
GAACTCGCCC GGACAATGGT GGATCTGGGG ACCGACGCTG GTGTAACAAC AACTGCGCTA
CTCACCGACA TGTCCACGCC GCTCGGACTC ACCGTTGGAA ATGCCCTTGA GGTGCGTGAA
TCCATTGAGG TGTTGGCCGG AGGCGGCCCT GCAGATGTTG TTGATCTGAC AGTTGCCCTC
GCAGCAGAAA TGCTCGCTGG AGCTGGGAAG ACAACCGCAG AAGACGACAT CCGCGCAGCA
CTGAACGATG GTCGTGCGAT GGATGCGTGG CGTGCCATGA TCGCAGCGCA AGATGGTGAC
AATGATGCAG CATTGCCCGT GGCAGCAGAG CAGCATGTCA TCACCGCTCC GCGCAGTGGG
TACCTCACCA CCCTTGACGC ATACGCGGTC GGTGTCGCCT CGTGGCGGCT CGGTGCAGGC
CGCGCCCGAA AAGACGATCA GGTTCAAGCC GGTGCCGGAA TTGAACTGCA TGCAAAGCCA
GGGGACAAGG TAACGGCAGG AGCCCCACTG ATGACTCTGC ACACCGACAC CCCAGAACGG
TTCGACCGTG CGATCGAGAT CGCTGAGGAA GGTGTTGTGA TCAGTGATGA CGCACCAACC
AACTCGCCAT CGCTCATTAT CGACCGGCTC GCATGA
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| Protein sequence | MTTHLFDTVD VIRAKRDGRE LTSEEIAWVI DAYTHDHVAD YQMAALNMAI LLNGMTRREI
ADWTRAMIES GERMNFDQLS RPTADKHSTG GVGDKITLPL APLVAVFDVA VPQLSGRGLG
HTGGTLDKLE AIAGWRAALT NDEMMHQLDT VGAVICQAGS GLAPADRKLY ALRDVTGTVE
AIPLIASSIM SKKIAEGTSA LVLDVKVGSG AFMKNVDQAR ELARTMVDLG TDAGVTTTAL
LTDMSTPLGL TVGNALEVRE SIEVLAGGGP ADVVDLTVAL AAEMLAGAGK TTAEDDIRAA
LNDGRAMDAW RAMIAAQDGD NDAALPVAAE QHVITAPRSG YLTTLDAYAV GVASWRLGAG
RARKDDQVQA GAGIELHAKP GDKVTAGAPL MTLHTDTPER FDRAIEIAEE GVVISDDAPT
NSPSLIIDRL A
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