| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0819 |
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| Symbol | |
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| ID | 8380002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 879740 |
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| End bp | 881569 |
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| Gene Length | 1830 bp |
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| Protein Length | 609 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645003560 |
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| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
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| Protein accession | YP_003160784 |
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| Protein GI | 256832057 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTCC ACCAATACGA CGTCGTCATC GTCGGCGCAG GTGGCGCCGG CATGCGCGCC
GCCCTCGAAG CATCAACTGA GGTACGAACC GCTGTTATTT CTAAGCTCTA CCCCACCCGA
TCCCACACAG GCGCAGCCCA AGGCGGCATG TGTGCAGCAC TGGCCAATGT CGAAGAAGAC
AACTGGGAAT GGCACACCTT TGACACCGTC AAAGGTGGCG ACTACCTCGT TGACCAAGAC
GCCGCCGAGA TCATGGCCAA AGAAGCAATC GACGCCGTGC TCGACTTAGA ACGCATGGGG
TTACCCTTCA ACCGCACCCC CGAGGGGCGC ATCGACCAGC GGCGTTTTGG TGGCCACACC
CGAAACCACG GAGAAGCCGC AGTCCGGCGT GCCTGCTACG CAGCAGACCG CACCGGGCAC
ATGATTTTGC AGACCCTTTA CCAAAACTGC GTGAAACAGA ACGTGGAGTT CTTCAACGAG
TTCTACGTCC TTGACCTCAT TGTTGACCAC GACCTCTCCG CTGGAGATGT CCCCGTGGGC
GAAGAAGTCA CCGCGACCGG TGTTGTCGCC TACGACCTCG CCACCGGTGA GATCCACATC
TTCCAAACAA AAGCAGTGGT GTTCGCTACC GGTGGTGCCG GCAAGATCTA CAAAACAACC
TCCAACGCCC ACACCCTCAC CGGTGACGGA ATGGCCCTGG CGTTGCGGCG CGGGCTCCCC
CTCGAAGACA TGGAATTCTT CCAATTCCAC CCCACAGGTC TTGCTGGACT GGGCATTTTG
CTGTCCGAAG CTGCACGAGG AGAAGGTGGG ATTCTCCGCA ACGGCCAAGG CGAACGGTTC
ATGGAACGGT ACGCCCCAAC CATTAAAGAC CTTGCACCAC GTGACATTGT GGCTCGTTCC
ATGGCAAACG AAGTCCGTGA AGGTCGTGGA GCAGGACCCA ACAAAGACTA TGTCCTGTTG
GACCTTACCC ACCTTGAACC CGCACACATC GACGCTAAGC TGCCCGATAT CACCGAGTTC
GCACGCACAT ACCTCGGCAT TGAGCCCTAC ACCGAACCTG TTCCGGTTTA CCCCACCGCC
CACTACGCTA TGGGCGGGAT CCCCACCACA ATCGACTCTG AGGTTCTGCG GAACCCGAAC
GATGTTGTCA AAGGTCTCTA TGCCGCTGGT GAAGTCGCGT GCGTGTCCGT CCATGGCGCG
AACCGTCTAG GCACGAACTC ACTCCTTGAC ATCAACGTGT TTGGGAAACG TGCTGGACGT
GCCGCAGCAG CCTACGCAAA GACAGCGTCC TTCGTTGATC TTCCCGACCA AGCAGCATCC
TGGGTCGTGG GACAACTGGA AGAGTTGCGC TCACGTCCTG ACGGTGAACG TGTGGCGGAT
ATCCGCAAAA CACTCCAAGA AACCATGGAC GCTAACGCGC AGGTCTTCCG GACCGAGGAA
TCACTCACCC AGGCGCTCGC CGACATCCGC ACCCTTCAAG AGCGTTACAG CCGAGTTTCA
GTTCAGGACA AAGGCAAAAT GTTCAACACT GACCTCCTGG AAGCGCTTGA ACTTGGGTTC
CTCCTTGACA TTGCTGAGGT CACCGTCATC GCAGCATTAA ACCGCCGTGA ATCTCGTGGT
GGTCACTTCC GTGAAGACTT CCCAGACCGC AACGACGAGG CCTACATGCA CCACACCATG
GTGTACCGGC GCCCGCTCGA CTCTTCGGTG TCTGGAAACA TCACCGACGA GGCTTTCTCC
CACGTCAGCG AATTTGACGA CTACAAGGTT GTGCTCGGCG CAAAACCCGT CGTGCAAACA
AGGTACGAGC CGATGGAGCG TAAGTACTGA
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| Protein sequence | MQFHQYDVVI VGAGGAGMRA ALEASTEVRT AVISKLYPTR SHTGAAQGGM CAALANVEED
NWEWHTFDTV KGGDYLVDQD AAEIMAKEAI DAVLDLERMG LPFNRTPEGR IDQRRFGGHT
RNHGEAAVRR ACYAADRTGH MILQTLYQNC VKQNVEFFNE FYVLDLIVDH DLSAGDVPVG
EEVTATGVVA YDLATGEIHI FQTKAVVFAT GGAGKIYKTT SNAHTLTGDG MALALRRGLP
LEDMEFFQFH PTGLAGLGIL LSEAARGEGG ILRNGQGERF MERYAPTIKD LAPRDIVARS
MANEVREGRG AGPNKDYVLL DLTHLEPAHI DAKLPDITEF ARTYLGIEPY TEPVPVYPTA
HYAMGGIPTT IDSEVLRNPN DVVKGLYAAG EVACVSVHGA NRLGTNSLLD INVFGKRAGR
AAAAYAKTAS FVDLPDQAAS WVVGQLEELR SRPDGERVAD IRKTLQETMD ANAQVFRTEE
SLTQALADIR TLQERYSRVS VQDKGKMFNT DLLEALELGF LLDIAEVTVI AALNRRESRG
GHFREDFPDR NDEAYMHHTM VYRRPLDSSV SGNITDEAFS HVSEFDDYKV VLGAKPVVQT
RYEPMERKY
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