| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0813 |
|---|
| Symbol | |
|---|
| ID | 8379996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 874245 |
|---|
| End bp | 875702 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645003554 |
|---|
| Product | peptidase S1 and S6 chymotrypsin/Hap |
|---|
| Protein accession | YP_003160778 |
|---|
| Protein GI | 256832051 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTACC CGCCATCACA CGAGCGGTTC GCTCCTCGAC CGCTCCCGCA AAACCACGGT
GACGCGTCAC AACACCCACC AGCGCCTCAA CCTGAACCAG CCCCGCAACA TGCGGAGCCA
GAACCTCAAA CGTCTCCTGT TCCCCAACCT CTGCCACTTG CGTCGCCAAC ACCGCCCCCA
CACTCTGGGC CTGTGACCGG ATTTGTCGTT CCCGGTACTC GTGGACCACA GCAGCGGCCA
CCATCTGCTC CACAATCGAA CTCGACAAGT GCCTTCACCA CAGGGGTTCC TCAACCGCCA
CAACCACCTA CCTGGACGTC CACCCAGCCT GGTCCCTCCT CACCACCCCG CGCTCCTCGC
CGCCGAGGGG GAACGGTCGC CCTCGTCTCA GTTGTTGCCG TTGTTGCCTC GCTTATCGGT
GGTGCACTGG GCTCACGGTT GGCAACCAAT GACTCAGTAG CGCGATCCTC AGTGATCTAC
CAGTCGGCAG AACAAGACAA TGCGGCACTG TCGCGACAAG AGGGCAGCGT CGCAGACATC
GCTGCACAAG TTCTTCCCTC AGTTGTTGCT ATCGAGGTGT ACTCGTCTTC TGGCGGATCA
ACTGGTTCCG GATTTGTTAT GACTAAAGAT GGCTACATTC TCACCAACGA ACACGTGGTC
GCTGAGGCTT CGTCAGCGAA CGACGTGATT GTCACCTTCT TCGATGGCAC CGAGCACGAG
GCGGAGGTCG TTGGGTCCAC GGTTGAGTAC GATCTTGCGG TGCTTAAGAT TGACCGGGAC
GATCTCACTG CCCTTCCCTT AGGAAATTCT GACGATGTTG TCGTCGGAGA CACCACCATT
GCTATCGGAG CTCCACTTGG CCTGCAGGGG ACTGTAACCA CGGGAATCGT GTCGGCGTTG
AATCGCCCTG TGAGTGCAGG CGGCGGGGAA GACGACATCT CCTACATCAA CGCCATCCAA
ACAGATGCTG CCATTAACCC TGGTAACTCA GGCGGTCCTT TAGTCAACGC CCGCGGCGAG
GTCATCGGCG TGAACTCTGC CATTGCTCAA CCGCCAGGCT CAATGGTCAC CTCCCCAGCA
GGAAGCATTG GATTGGGATT TGCTATTGGC TCCAACCAGG CAGCACGCAC CGCAGGTGAG
ATTATCGAAC GAGGATACGC AACCTATCCA ATCATCGGGG TTGTGCTCGA CTCCACTTAT
CAAGGGCAGG GCGTCCAAGT GATTCGTAGC CCGCAAGGGG GAAGCGATCC GGTCACCCCA
GACGGTCCGG CTGATCGTGC CGGGATAGAA GCTGGCGATG TGATCACTGC CATTGACGAG
CGGCCAGTCA CCTACGCTGA CGAACTCATT GTCGCGATCC GCGCAAAAGC ACCTGGAGAC
ACGGTCACGC TGACTGTGCG CACCTCAGGC GGTGAACGAC AAGTCAAGGT AACCCTTGAT
GAGGCACGAA GCGAATAG
|
|---|
| Protein sequence | MTYPPSHERF APRPLPQNHG DASQHPPAPQ PEPAPQHAEP EPQTSPVPQP LPLASPTPPP
HSGPVTGFVV PGTRGPQQRP PSAPQSNSTS AFTTGVPQPP QPPTWTSTQP GPSSPPRAPR
RRGGTVALVS VVAVVASLIG GALGSRLATN DSVARSSVIY QSAEQDNAAL SRQEGSVADI
AAQVLPSVVA IEVYSSSGGS TGSGFVMTKD GYILTNEHVV AEASSANDVI VTFFDGTEHE
AEVVGSTVEY DLAVLKIDRD DLTALPLGNS DDVVVGDTTI AIGAPLGLQG TVTTGIVSAL
NRPVSAGGGE DDISYINAIQ TDAAINPGNS GGPLVNARGE VIGVNSAIAQ PPGSMVTSPA
GSIGLGFAIG SNQAARTAGE IIERGYATYP IIGVVLDSTY QGQGVQVIRS PQGGSDPVTP
DGPADRAGIE AGDVITAIDE RPVTYADELI VAIRAKAPGD TVTLTVRTSG GERQVKVTLD
EARSE
|
|---|
| |